| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4342 |
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| Symbol | |
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| ID | 6412026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4668607 |
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| End bp | 4669776 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642714224 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_001993313 |
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| Protein GI | 192292708 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.636154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTGGC GTGAGGTGTC GGCAGTGGAT CAGAGACGAG AGTTCGTCCG GCTTGCGATG
CAGGAGGGAG CGAACCGGCG GGAGTTGTGC CGGCGGTTCG GCATTCATTG GACGACCGGC
TACAAATGGT TGGAGCGATG CGCGGCCGGA GGTGATGTCG TCGACCTATC GCGGCGGCCG
CACGAAAGCC CGCGGCAAAC CTCGGCGGCG TGCGAGGCAC AGGTGCTGGC GGTTCGCGAT
GCGCATCCGG CGTGGGGGGC GCGCAAGATC GCTAGCTCGA TGAAGCGGTC CGGACACAGC
GCTCCGGCGG TGTCGACGAT CCACGAGATC CTGCGCCGGC ACGGCCGGAT CAAGCCTGCC
GCCGGCGGTC CACCGGCGAC ACAGCGGTTC GAGATGCCGG CGCCGAACAT GCTTTGGCAG
ATGGACTTCA AAGGCTGGGT TCGGCTCGGC AACGACGTCC GCTGCCATCC GCTGACCGTG
GTGGACGATC ACTCACGCTA CGATCTGTGC CTCCAGGCTT GCGCCGATCA GCGCGGCGAA
ACCGTGCAGG ACAGGCTGCA AACGACGTTC CGGCACTACG GCTTGCCCGA CACGATCTTC
GTCGACAACG GCTCGCCGTG GTCGGATAGT TCCGGCGAGC GTTGGACATG GTTCTCGGTG
TGGCTGCTCA AGCTCGGCAT CAGGGTGATC CGTAGTCGTC CCTATCACCC GCAGAGCCGC
GGCAAGAACG AGCGTTTTCA TCGCACGCTG GACGACGAGG TGTTTGCGCT GCGGCCCTTG
CGCGACCTCG CCGAGGCGCA ACGTGCCTTC GACTCCTGGC GCGAGGTGTA CAACTTCGAG
CGCCCTCACG AGTCGCTAGG CCAGCTGGTG CCTGCTGATC GCTACCAGCC GAGCCGGCGT
TCTCTGCCGG ACCGCCTGCC GGCTCCAGAA TACGATGAGC GCGACATCGT CCGCTCCGTC
CCGAAAACCA AGGCCTATGT CAGCTTCAAA GGTCGTTTGT GGAAGGTGCC GCAAGCCTTC
GCCGGAGAGC GCTTGGCCAT CAGGCCGCTC TCCACCGACG GCAAATACGG CGTGTTCTTC
GCCGCCCACC AAGTCGCCAC CATCGACTTG ACCGGCGGGG AAAGTGTCGG TCATGTCTCC
GAACACGTGT CGACTATGTC TCCGGGCTGA
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| Protein sequence | MPWREVSAVD QRREFVRLAM QEGANRRELC RRFGIHWTTG YKWLERCAAG GDVVDLSRRP
HESPRQTSAA CEAQVLAVRD AHPAWGARKI ASSMKRSGHS APAVSTIHEI LRRHGRIKPA
AGGPPATQRF EMPAPNMLWQ MDFKGWVRLG NDVRCHPLTV VDDHSRYDLC LQACADQRGE
TVQDRLQTTF RHYGLPDTIF VDNGSPWSDS SGERWTWFSV WLLKLGIRVI RSRPYHPQSR
GKNERFHRTL DDEVFALRPL RDLAEAQRAF DSWREVYNFE RPHESLGQLV PADRYQPSRR
SLPDRLPAPE YDERDIVRSV PKTKAYVSFK GRLWKVPQAF AGERLAIRPL STDGKYGVFF
AAHQVATIDL TGGESVGHVS EHVSTMSPG
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