Gene Rpal_4316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4316 
Symbol 
ID6412000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4645258 
End bp4645668 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content61% 
IMG OID642714198 
Producthypothetical protein 
Protein accessionYP_001993287 
Protein GI192292682 
COG category[S] Function unknown 
COG ID[COG4954] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTCG ATACCAAGAT CGCGCTCGTG ATCCGCACCG ATCTCGAAGC CTGGCAGAAG 
CTGAACGTTG CGGCGTTTCT TACCTCCGGC ATCGCCGCGG CGTTCCCGGA GTGCATCGGC
AAACCGTATC AAGACGGCAG TGGTACGCCG TATCATCCGC TGATCGGTCA GCCGATTCTG
GTTTACGGTG CCGATGGACC CGGATTATCG CGTGCACTGG AACGGGCGCT CGCCCGCAAC
GTCAAGCCGG CTATCTATAC AGAAGCGATG TTCAAAACCA CGCACGACGC AGCCAACCGC
GAAGCGGTGA AGGCGGTCGC GCGGGCCGAT CTGCCGTTGG TCGGCTTGGC TGTCCGGGCC
GATCGCAAGG TGGTCGACAA GATCCTCGAC GGTCTCAAAT TCCATGCCTG A
 
Protein sequence
MQFDTKIALV IRTDLEAWQK LNVAAFLTSG IAAAFPECIG KPYQDGSGTP YHPLIGQPIL 
VYGADGPGLS RALERALARN VKPAIYTEAM FKTTHDAANR EAVKAVARAD LPLVGLAVRA
DRKVVDKILD GLKFHA