| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4284 |
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| Symbol | |
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| ID | 6411968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4611558 |
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| End bp | 4613183 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714166 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993255 |
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| Protein GI | 192292650 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.95304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCA TGACCGGCGG CGAAGCCATC GTGCAGGGCC TCGTCGCGCA CGGCGTCGAC
ACCGTGTTCG GCCTGCCCGG CGCGCAGATC TACGGCCTGT TCGACGGCTT CGCCAAAGCG
CAACTGAAGG TGATCGGCGC GCGGCACGAG CAAGCCTGCG GCTATATGGC ATTCGGCTAC
GCCCGCGCCT CCGGCAAACC CGGCGTGTTC AGCGTCGTGC CCGGCCCCGG CGTGCTCAAC
GCCGGCGCGG CGCTGCTCAC CGCGTTCGGC TGCAACGAGC CGGTGATGTG CCTCACCGGC
CAGGTGCCGA GCGCATATCT CGGCAAGGGC CGCGGCCATC TGCACGAGAT GCCGGATCAA
CTGGCGACCC TGCGCAGCTT CATCAAATGG GCCGAGCGGA TCGAATATCC GGGCAACGCG
CCAGCGCTGG TGGCGCGCGC GTTCCAGGAG ATGATGAGCG GCCGCCGCGG ACCTGTGGCG
CTGGAAATGC CGTGGGAGGT GTTCACGCAA ACCGCCGAGA CCGGCGCGGC GCAGAAGCTC
GATCCGATCG CACCACCCGC CCCCGATCCG GATCGCATCG CCGCCGCGGC GAAGCTGATC
ACGGCCAGCA AGACACCGAT GATCTTCGTC GGCTCCGGCG CGCTGGAGGC CGGCGACGAG
ATCCTCGAAC TCGCCGAGAT GATCGACGCG CCGGTGGTGG CGTTCCGCTC CGGCCGCGGC
ATCGTCAGCA ACCGGCACGA ACTCGGGCTG ACGTTCGCAG CGGCCTATCA GCTGTGGCCG
CACACCGACC TGATCATCGG CATCGGCACC CGCATGGAGC TGCCGACCAC CTTCCGCTGG
CCGTTCCGCC CCGAGGGGCT GAAGTCGGTG CGGATCGACA TCGATCCGGC GGAGATGCGG
CGGTTCGCGC CGGACGCGGC GATCGTGTCG GATTCGAAAG CTGGCGCCCG CGCGCTGGCC
GATGCGGTGA GCAAGGCGGG CTATTCAAAG ACGAAAGGCC GCCGCGAGGC GATCCGCGCC
GCCACGGCGA AGACGCAGCA GGACATCCAG GCGATCCAGC CGCAGATGTC GTACTTGAAG
ATCCTGCGCG AGGTGCTGCC GGACGATGCG ATCGTCACCG ACGAGCTGTC GCAGGTCGGC
TTCGCCTCCT GGTACGGTTT CCCGATCTAT CAACCGCGCA CCTTCCTCAC TTCCGGCTAT
CAGGGCACGC TCGGCTCGGG CTTTCCGACC GCGCTCGGCG CCAAGGTGGC GTGCCCGGAC
AAACCGGTGG TGGCGATCAC CGGCGACGGC GGCTTCATGT TCGGCGTGCA AGAGCTTGCC
ACAGCGGTCC AATACAACAT CGGCGTGGTG ACGCTGGTGT TCGACAATTC CGCCTACGGC
AACGTCCGCC GCGACCAGGT CAATCTGTTC GACGGTCGCG TGGTGGCGTC CGATCTGGTC
AATCCGGATT TCGTCAAGCT CGCCGAGTCG TTCGGCGTCG GCGCCGCGCG CGTCACCTCA
CCCGACCACT TCCGCCCCGC GCTGGAAAAA GCGCTCGCCG CCGGCGGCCC GCAGCTGATC
GCGATCGACG TCCCGCGCGA CAGCGAAGCC AGCCCGTGGC CGTTCATCCA TCCGGCGAAG
CCGTAG
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| Protein sequence | MSIMTGGEAI VQGLVAHGVD TVFGLPGAQI YGLFDGFAKA QLKVIGARHE QACGYMAFGY
ARASGKPGVF SVVPGPGVLN AGAALLTAFG CNEPVMCLTG QVPSAYLGKG RGHLHEMPDQ
LATLRSFIKW AERIEYPGNA PALVARAFQE MMSGRRGPVA LEMPWEVFTQ TAETGAAQKL
DPIAPPAPDP DRIAAAAKLI TASKTPMIFV GSGALEAGDE ILELAEMIDA PVVAFRSGRG
IVSNRHELGL TFAAAYQLWP HTDLIIGIGT RMELPTTFRW PFRPEGLKSV RIDIDPAEMR
RFAPDAAIVS DSKAGARALA DAVSKAGYSK TKGRREAIRA ATAKTQQDIQ AIQPQMSYLK
ILREVLPDDA IVTDELSQVG FASWYGFPIY QPRTFLTSGY QGTLGSGFPT ALGAKVACPD
KPVVAITGDG GFMFGVQELA TAVQYNIGVV TLVFDNSAYG NVRRDQVNLF DGRVVASDLV
NPDFVKLAES FGVGAARVTS PDHFRPALEK ALAAGGPQLI AIDVPRDSEA SPWPFIHPAK
P
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