| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4260 |
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| Symbol | |
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| ID | 6411944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4580517 |
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| End bp | 4581260 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714142 |
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| Product | hypothetical protein |
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| Protein accession | YP_001993231 |
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| Protein GI | 192292626 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR03468] hopanoid-associated phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTCTGG GGGCAGTGGA CGACCAGGCC GCGGCGCTTC GCCAAGATCC GCGGCCGGTA
CTGATTGTGA CGGGCCTGAT TCAGGAAGCA CGTATCGCGG CGGGGCCGGG CCTCACCGTT
ATCTGCAGCA GCAGTGACCC CAAGCAATTG CGCGCGATCA TGGCCGACTT CGACGCATCG
TCGATCCGGG GCGTGATCAG CTTCGGCGTC GCCGGGGGGC TGGATCCCTC TCTCGAGGCA
GGTGACATCG TCATCGCCAC CGAGGTTGTG GCGGGTGAAC GCCGCTGGAC GTCGGAAGTT
GCACTGACCG ACGAATTATT GCGAAGCGCC GGGCTCGGCC GTCAGCGCGT CGTGCGCGGC
GGTCTGGTCG GCGCCGAGCA GGTGATCGCA GCGCGCTCCG CCAAGGCGGC GCTGCGCTCG
GAGACCGGTG CGGCTGCGGT CGATATGGAA AGCCACATCG CCGCCGATTT CGCCGCCGCC
GCCAAGCTGC CGTTCGCGGC GCTCCGGGTG ATCAGCGATC CGGCGAATCG CAGCCTGCCG
CAGATCGTGT CGAGCGCGAT CAAGCCGAAC GGCGATATCG ACCTGCGCAA GGTGCTGCGC
GGCATCGCCC GTCACCCGAC CTCGATCCGC TCGCTGGTGT CGACCGGCAT CGACTTCAAC
CGCGCGCTGC GCTCCCTGCG CGGCTGTCGG AACTTTGTGC AGGACGCCGT GCTCGGCCGC
GGCGGTCTCG TCGCCGAGAT CTGA
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| Protein sequence | MILGAVDDQA AALRQDPRPV LIVTGLIQEA RIAAGPGLTV ICSSSDPKQL RAIMADFDAS
SIRGVISFGV AGGLDPSLEA GDIVIATEVV AGERRWTSEV ALTDELLRSA GLGRQRVVRG
GLVGAEQVIA ARSAKAALRS ETGAAAVDME SHIAADFAAA AKLPFAALRV ISDPANRSLP
QIVSSAIKPN GDIDLRKVLR GIARHPTSIR SLVSTGIDFN RALRSLRGCR NFVQDAVLGR
GGLVAEI
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