| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4228 |
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| Symbol | |
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| ID | 6411912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4538075 |
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| End bp | 4539235 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642714110 |
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| Product | putative nitrate transport protein |
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| Protein accession | YP_001993199 |
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| Protein GI | 192292594 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0904389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGC GGCTGCGCAT CGGATTCATC CCGCTGGTCG ACGCTGCCGC GCTGATCGTC
GCCGCCGACA AGGGCTTCTG CGCCGCCGAG GGCCTCGACG TCGAGCTGGT GCGCGAGATC
TCCTGGGCCA ACGTCCGCGA CAAGTTCAAC ATCGGCCTGT TCGACGCCGC GCATCTGCTG
GCGCCGCTGG CGGTCGCCTC CAGCCTCGGC ATCGGTCACG TCAAGGTGCC GGTGATTTCC
GGCTTCGGCC TGGGCGTCAA CGGCAACGCC ATTACGGTAT CGCCGGACCT GCACGCCGCG
ATCGTCACGA TGGCCGATGG CGACGTCGCC GATCCGCTGG TGTCGGGACG CGCGCTGGCG
CGGGTCGTCG CCGAGCGACG CGCCAAGGGC CAGGAGCCGC TGACCTTCGG GATGACCTTC
CCGTTCTCCA GCCACAATTA CGATTTGCGG TTCTGGATGG GCGCCGGCGG CGTCGATCCG
GACGAGGACG TGCGGCTGGT GGTGCTGCCG CCGCCGTTCA TGGTGGAGAG TCTCGCCAGC
AAGCATCTCG ACGGCTTCTG CGTCGGCGCG CCGTGGAATT CGGTTGCGAT TGATCTGGGC
ATCGGAACCA TCCTGCATTT CACCAGCGAG CTGTTTCAGC GCGCCGCCGA GAAGATGCTG
ACGGTGCGGG CGACCTGGGC CGCGCAGCAC CCCGAGGTGC TGCAAGCGCT GATCCGCGCC
CACGTCCGCG CCGCCGACTA CATCGAAGAC GTCGCCAACC GCGACGAGGT TTGCGCCCTG
CTCGCTGCGC CGGGCCGAAT CGAGGTGACG CCGGAGCTGA TCCGCCGCAC CCTCGACGGC
CGACTGAAGG TCGCGGCCGA CGGCACGCTG CGCACCAGCG ACCGCTATCT GCTGGTCGGG
CGCGAAGCCG CGGCGCGGCC CGATCCGGTG CAGGGCGCGT GGAACTACGC CCAGATGGTA
CGGTGGGGAC AGGCGCCGCT GTCGACCGAT CTGCTCGCCG CCGCCAAAGC GGTGTTCCGG
CCGGACCTGT ATGACGCAGC GGTCGGCACG GCTCCTGCGT TGCCGAGCGC GCCCGCCGAC
GGCATCGGCG AGTGCACCGG CGCGCCGTTC GATCCCGACG ACATCGCCGG CTATCTGGCG
CGGATGACGA TCCGGCGCTG A
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| Protein sequence | MSERLRIGFI PLVDAAALIV AADKGFCAAE GLDVELVREI SWANVRDKFN IGLFDAAHLL
APLAVASSLG IGHVKVPVIS GFGLGVNGNA ITVSPDLHAA IVTMADGDVA DPLVSGRALA
RVVAERRAKG QEPLTFGMTF PFSSHNYDLR FWMGAGGVDP DEDVRLVVLP PPFMVESLAS
KHLDGFCVGA PWNSVAIDLG IGTILHFTSE LFQRAAEKML TVRATWAAQH PEVLQALIRA
HVRAADYIED VANRDEVCAL LAAPGRIEVT PELIRRTLDG RLKVAADGTL RTSDRYLLVG
REAAARPDPV QGAWNYAQMV RWGQAPLSTD LLAAAKAVFR PDLYDAAVGT APALPSAPAD
GIGECTGAPF DPDDIAGYLA RMTIRR
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