| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4199 |
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| Symbol | |
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| ID | 6411883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4501904 |
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| End bp | 4502485 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714081 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001993170 |
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| Protein GI | 192292565 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.335667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGAAAG TGAAGCGTAT GAATCCCGCG CGCATTGTCG TGCTGACCAT CGCTGTCGGT
GCCGGTGGCG TCGCCGCTTA TCTGGCCAGC AGCACCGGTC CGCAGCCGGG TGCCCCTGCC
GCGCCCGTTG CGCAGACCGT CGAGGTCCTG GTCGCCAAGA ACGACATTCC GCTCGGTCAA
GCCGTGACGC CCGGCGATCT GCAATGGCAG ACTTGGCCCG CCGCAACCGC CAGCTCGAAC
TTCATCCGCC GCGACCTTCA CCCCGGTGCC ACCACCGATA TCGGCGGCTC GATCACCCGT
GCGCCCTTCA TTGCCGGCGA GCCGATCCGC AGACAGAAGC TGGTCCAAGC CGATGGCTCC
AGCTCCGTGC CCGCGTTCGT GCCCACCGGC ATGCGCGCCA TTTCGACTGA GACCGCTCTG
GAGCCCGGCG CGACCGGCGC ACGACAGAGC GGAACGCTGT CGCTGGCGCC GCTCCTTGCC
GCTGCGCGGC AGACTGCCTC GAACGACACC ACCGAAGCCA AGCGTGGCAT CGTCAAAGTG
GCGCGCTACG AAATTACCAC TCAGGCATCG TTGCAGAGAT GA
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| Protein sequence | MWKVKRMNPA RIVVLTIAVG AGGVAAYLAS STGPQPGAPA APVAQTVEVL VAKNDIPLGQ
AVTPGDLQWQ TWPAATASSN FIRRDLHPGA TTDIGGSITR APFIAGEPIR RQKLVQADGS
SSVPAFVPTG MRAISTETAL EPGATGARQS GTLSLAPLLA AARQTASNDT TEAKRGIVKV
ARYEITTQAS LQR
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