| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4198 |
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| Symbol | |
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| ID | 6411882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4501273 |
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| End bp | 4501797 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642714080 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001993169 |
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| Protein GI | 192292564 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.625341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCG ACCTGCTTCG CATTTCGCTG TTTCCCGCGT TGATGGCCTT CGCCGCAACC
AGCGACTTGC TGACGATGAC GATCTCCAAC CGGATTTCGC TTTTGCTCGT CGCGGGCTTT
CTAGTCTTGG CCCCGCTCAC CGGGCTCGGT GCCTACGACA TCCTGCTGCA CTTCGGCGCC
GGCGCGTTGG TGCTTGCGGT CGCCTTCGGC TGTTTTGCGA TGGGCTGGAT CGGAGGCGGC
GACGCCAAGG TGGTGGCCGC CGCGGCACTG TGGTTCGGCT TCGACCACCT GCTGGACTAC
CTGCTGTATG CTTCGCTGTT CGGCGGAGCG CTGACGCTGC TGCTGCTCGG CTTTCGGCAA
TGGCCCCTGC CCTATCGTCT TGCCTGCCAG GGCTGGGTCC TGCGGCTGCA CGACCAGCAA
ACCGGCATTC CTTACGGCAT TGCGCTGGCG ATGGGCGCGC TGGTGATCTA CCCGCACACC
GAATGGATCA AGGCGGTCGA TATCGCCCGT TTCACCCTGA GCTGA
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| Protein sequence | MIADLLRISL FPALMAFAAT SDLLTMTISN RISLLLVAGF LVLAPLTGLG AYDILLHFGA
GALVLAVAFG CFAMGWIGGG DAKVVAAAAL WFGFDHLLDY LLYASLFGGA LTLLLLGFRQ
WPLPYRLACQ GWVLRLHDQQ TGIPYGIALA MGALVIYPHT EWIKAVDIAR FTLS
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