| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4178 |
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| Symbol | |
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| ID | 6411862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4482142 |
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| End bp | 4483704 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642714060 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001993149 |
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| Protein GI | 192292544 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCG AGCTCAACGC TTTTCCGACC GCGGGCACGC AGACGTTGCG GGCGCTGGCG
CGCTATCCGT CGCGCACCGC GTTCGCCTGG CCCGGCGGCA GCTTGAGCTA TCGCGGCGCC
ACCGACATGA TCGGCAGCAT CCAGAAGGTG TTCATGGGTC TCGGCCTGCC GCCGGGCACG
CGGGTTGCGC TGCTCACCGC CAATCGTGCC GAGACCTGGT GCGCCGGCGT TGCGGCGCAG
CTCTGCCGTT TCGCCATCAC CTGGCTGCAT CCGCTCGGCT CGCGCCAGGA TCAGCTCGAC
CAGATCGAGG ACTCCGAAGC GGCGGTGCTG ATCGTCGATG CCGCCGCCTT TCTGGAACGC
GGCGGCGAGC TTGCCGCCCA GGCCAGCGGC TTGCGCCACG TCTTCACCAT CGGCCGTGCC
GACTACGGGC TCGATCTGCT GATCGCGCTG GATCAGGCCG GCAGCGCCAC GCCGCGCGAC
TTCGCGCAGC TCGATGATGT CGCGGTGCTG AACTACACCG GCGGCACCAC CGGGAAATCC
AAAGGAGCGT TGCGCCACCA TCGCGAGAAC GCCGGTTTCG CCAATGCGAT CCTGGCCGAT
TTCGAAATCC CGTTCGATCC GCGCTATCTC ACGGTGGCGC CGATCAGCCA CGTCGCCGGG
ACCAAGGTGC TGCCGTCGCT GATCCGCGGC GGCACCATCC ACATGATGAA GGGGTTCGAT
CCAGAAGCGG TGCTGCAGAC GATCGAGCGC GAGAAGATCA ACTTCACGCT GTTCGTGCCG
ACGATGATCT ACGTGCTGCT CGATCATCCG GCGCTCGCCA AGACCGATCT GTCGTCGCTC
GACCTGGTGC TGTACGGCGC CTCGCCGATG TCGCCGACGC GGCTGGTCGA AGGCATCGAG
CGGATCGGGC CGGTGTTCTC GCAGCTCTAC GGCCAGACCG AGTGCTATCC GGTCTCGGTG
CTGCGCAAGG CCGATCACGA TCCGAAGCAG CCGGAGCTGT TTCTGTCGTG CGGCTTTCCG
ATCGCGGCTT GCGACGCTCG GATTCTCGAC GAGAACGATC AGGAAGTGTC GCTCGGCGAG
GCCGGCGAGA TCTGCGTGCG TGCGCCGCAC GTGATGGCGG AATATTGGAA GCGCCCGGAG
CAGACCGCCG AAACGCTGAA GAGCGGCTGG CTGCACACCG GCGACATCGC CAAGCAGGAC
GACCGCGGCT ACATGTACAT CCTCGACCGC AAGAAGGACA TGATCGTGTC CGGCGGCTTC
AACATCTTCC CGCGCGAGGT CGAGGACGTG TTGTCGACCC ATCGGGACGT CGCGATGGTC
GCGGTGGTCG GCGTGCCCGA CGACAAATGG GGCGAAGCGG TCACCGCCGT CGTCGTCGCC
AAGCCTGGCA CCAAGCCCGA CGAGCGCGAG TTGATCGAGC TGGTCAAGAC CCGCAAGGGC
TCGGCGCATG CGCCGAAACA GGTGCAGTTC GTCACCGAGC TGCCGATGAC CGGCGTCGGC
AAGATCGACA AGAAAGTGCT GCGCGCCGGC TTCTGGGCCG GTCGGGATCG GATGGTCGGG
TAG
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| Protein sequence | MTAELNAFPT AGTQTLRALA RYPSRTAFAW PGGSLSYRGA TDMIGSIQKV FMGLGLPPGT
RVALLTANRA ETWCAGVAAQ LCRFAITWLH PLGSRQDQLD QIEDSEAAVL IVDAAAFLER
GGELAAQASG LRHVFTIGRA DYGLDLLIAL DQAGSATPRD FAQLDDVAVL NYTGGTTGKS
KGALRHHREN AGFANAILAD FEIPFDPRYL TVAPISHVAG TKVLPSLIRG GTIHMMKGFD
PEAVLQTIER EKINFTLFVP TMIYVLLDHP ALAKTDLSSL DLVLYGASPM SPTRLVEGIE
RIGPVFSQLY GQTECYPVSV LRKADHDPKQ PELFLSCGFP IAACDARILD ENDQEVSLGE
AGEICVRAPH VMAEYWKRPE QTAETLKSGW LHTGDIAKQD DRGYMYILDR KKDMIVSGGF
NIFPREVEDV LSTHRDVAMV AVVGVPDDKW GEAVTAVVVA KPGTKPDERE LIELVKTRKG
SAHAPKQVQF VTELPMTGVG KIDKKVLRAG FWAGRDRMVG
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