| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4177 |
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| Symbol | |
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| ID | 6411861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4481068 |
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| End bp | 4482030 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642714059 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001993148 |
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| Protein GI | 192292543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATCAT CCGACCGTCT GGCGCGCTTC GGCGATCGTC TCAGTTTGCC GCTGATTGCG
GCACCGATGT TTCTGGTGTC CGGCGTCGAT CTGGTGGCTG CGGCGTGTAG TAGCGGCGTG
ATAGGATCAT TTCCGACAGT GAATTGCCGT ACGACGGAAC AACTCGGGGG CTGGCTCGAT
GAGATCACGC GCCGAATCGC GGCACACGAG CAGGCGAGCG GCCGGCGCGC CGCGCCGTGG
TGCCCGAACC TGATCGTGCA TCGCTCCAAC GCGCGGCTCG GCGACGATTT GAAGCTGCTG
CTACAGCATC GGCCGGAGGT GGTGATCACC AGCGTCGGCT CGCCGCAGCC GGTGATCGCG
CCGCTGCACG ATGTCGGCGC CATGGTGCTC GCCGACGTTG CGAGCATTCG TCATGCCGAA
CGCGCGGTGG CGGCCGGAGT TGACGGCCTG GTGTTGCTCA CCGCCGGTGC CGGGGGCCAG
ACCGGTTGGC TCAATCCGTT CGCCTTCGTG CGTGCGGTGC GGCAGTTCTT CGACGGCGTG
ATCGTGCTGG CCGGCGGCAT CAGCGACGGC GTCGCGCTGC GCGCCGCGAT GACGCTCGGC
TGCGACCTCG GCTACATGGG CACCAAGTTC ATCGCCACCG AGGAGAGCCT CGCCGATCCG
CGCTACAGGG CGATGCTGGT GGAGGCGAGC GCCGACGACA TCCTGCTGAC CAAGGCGTTC
ACCGGGCTGC AGACCAACAT GCTGCGGCCG TCGATCGTTG CCGCCGGGCT CGACCCCGAC
GATCTGCCGG AGCGCGGAGG CATCGACATC GGCAAGGATA TCGACGTCGG TGCACGGGAA
GACCGGCCGA AGCGCTGGCG CGACATCTGG AGCGCCGGTC ATTCGACCTC CGGCATCGGC
GGCGTCGTGC CGATTGCGGA GCTGGTGGCG AAGACCACGG CCGAATTCCG CAGCGCGGCG
TAG
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| Protein sequence | MKSSDRLARF GDRLSLPLIA APMFLVSGVD LVAAACSSGV IGSFPTVNCR TTEQLGGWLD
EITRRIAAHE QASGRRAAPW CPNLIVHRSN ARLGDDLKLL LQHRPEVVIT SVGSPQPVIA
PLHDVGAMVL ADVASIRHAE RAVAAGVDGL VLLTAGAGGQ TGWLNPFAFV RAVRQFFDGV
IVLAGGISDG VALRAAMTLG CDLGYMGTKF IATEESLADP RYRAMLVEAS ADDILLTKAF
TGLQTNMLRP SIVAAGLDPD DLPERGGIDI GKDIDVGARE DRPKRWRDIW SAGHSTSGIG
GVVPIAELVA KTTAEFRSAA
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