Gene Rpal_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_4079 
Symbol 
ID6411763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp4378512 
End bp4378868 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content67% 
IMG OID642713961 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001993050 
Protein GI192292445 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0764894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CCGCCGATAT CGCCCGCTTC GCCGACATGC TCGCCGCGAT GGGCACCGAG 
CCCAGACTCC GCATCATGCG CACGCTGCTG TCGGCGCATC CGGACGGGCT GGTGGTCGGC
GAGATCGGCG ACGAACTCGG CATCGCCCCC TCCACGCTGT CGCATCATCT CGACAAGCTG
AAGAACGAGG GCTTGGTGCA GTCCCGCCGC GAAAGCACCT TCCTGCGCTA CACCGCCAAC
GCCGATGCGC TGCGCGAGCT GCTGGCCTTC CTCTATGCCG AATGCTGCAC CCGCTCCCGC
GCGGTGCGGG CCGAAGACGT CGTCTGCTGC CCAACGGAGA ACCGCAATGC CCACTGA
 
Protein sequence
MTDTADIARF ADMLAAMGTE PRLRIMRTLL SAHPDGLVVG EIGDELGIAP STLSHHLDKL 
KNEGLVQSRR ESTFLRYTAN ADALRELLAF LYAECCTRSR AVRAEDVVCC PTENRNAH