| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_4038 |
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| Symbol | |
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| ID | 6411721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4330799 |
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| End bp | 4331707 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642713920 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_001993009 |
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| Protein GI | 192292404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.890375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGGCAC AGCGGATCGC GCTCGGACTG CGGAACGGAG AGACTTCTCG CAGGGGCGAT
CGCCTGCGGC GCGGGCTGCC GATGATCTTC AGCCTGCTGG CGCTGTCGCT TCCGCTCGGC
GGCTGCGGCA CCGGCGCGTT GTGGGACAAG TTCCTGGCCA AAGACGACAA GATGGTCGAT
GAGCCGGCGG ACAAGCTCTA CAACGAGGGC TTGTATCTGA TGAATCAGGA CAAGGACACC
AAGGGCGCCG CCAAGAAGTT CGAGGAAGTC GACCGTCAGC ACCCGTATTC GGATTGGGCG
CGCAAGTCGC TGCTGATGTC GGCCTATGCT TATTATCAGG CCGGCGACTA CGACAGCTGC
ATCGGCTCGG CGACCCGCTA CGTCACGCTG CATCCCGGCA GCCCCGACGC CGCCTATGCG
CAGTATCTGA TCGCGGCGTC GAATTACGAC CAGATCCCGG ACATCTCGCG CGACCAAGGC
CGCACCGAAA AGGCGATCGC CGCGCTCGAA GAGGTGATCC GCAAATATCC GACCTCCGAA
TATGCCAACA GCGCCAAGCA GAAGCTGGAA GGCGCCCGCG ATCAGCTCGC CGGCAAGGAG
ATGGATATCG GCCGCTATTA CATGAGCAAG CGCGACTACG CCGCGGCGAT CAATCGGTTC
AAGACCGTGG TGACGCGCTA TCAGACCACC CGCCACGTCG AAGAGGCGCT GGCACGTCTG
ACCGAGGCCT ATATGGCGAT CGGCATCGTC GGCGAGGCGC AGACCGCCGC CGCCGTGCTT
GGCCACAACT TTCCTGACAG CCGCTGGTAC AAAGACGCCT ATAATCTTGT AAAGTCGGGT
GGTTTAGAAC CCGCCGAGAA CAAGGGCTCC TGGATCAGCA AGTCCTTCAA AAAGCTCGGT
CTCGGATAG
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| Protein sequence | MSAQRIALGL RNGETSRRGD RLRRGLPMIF SLLALSLPLG GCGTGALWDK FLAKDDKMVD
EPADKLYNEG LYLMNQDKDT KGAAKKFEEV DRQHPYSDWA RKSLLMSAYA YYQAGDYDSC
IGSATRYVTL HPGSPDAAYA QYLIAASNYD QIPDISRDQG RTEKAIAALE EVIRKYPTSE
YANSAKQKLE GARDQLAGKE MDIGRYYMSK RDYAAAINRF KTVVTRYQTT RHVEEALARL
TEAYMAIGIV GEAQTAAAVL GHNFPDSRWY KDAYNLVKSG GLEPAENKGS WISKSFKKLG
LG
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