| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3992 |
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| Symbol | |
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| ID | 6411674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4277832 |
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| End bp | 4280048 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713874 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992963 |
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| Protein GI | 192292358 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTTC CCGCGCTCAA TATCCCGATC CGCGCCGACG TCGACAAATT CCAGCGCGAC
ATGAACAAGG CGGCGGACGT CGCCGGCAAA GCCACCATGG CGATCACCAG CAAGGTGATT
GCGATGAACA GCACCTTCCT TGCCTCTCAA GGCGCGGCTG GCGTGGCAAC GCTGGCGCTT
GGCCGTGTGC TCGGCGTCGT CGGGCCGCTC GCGCTGGCAA TCACTGCGGT CAAGGACACG
TTCGATTTCT TGCGCTATTC GGTGAAGCTG GCCGGCGATC GGATTGAAGA GTTCAACGGC
ATCGCTGCCA AGGCGGCGAG CGCCAACGTC ACCACCGATT TCTACCAGCG CATTGAGAAG
GCCGCGAAGG GCGCAGGCCT ATCGATCGAT GACAGCGCCG ACGCGCTGCG GCGCTTCAAC
GACGCCACCA GCACCAAGCT CGGCGGCAGC GACCTCGATA AACGCCTCAA GGAACTGTCG
GACGCGGGCA ACCTGTCCGG CAACCGCGGG CTGGCGCAAC TCAGCATCGC CACGGGCACC
GAGGAACGCA TCCGCACCGT TGTCCGGCTG ATCGATGAAG CCATGCAGAA GGGAGAGCGC
CTTGCCGCCA TCGACATTGC AGAGAAGGCG TTCGGATCGA AGGTCGCGGC CAACCTCAAG
GCCGATGCCG GCTACCTTGA CCAGCTTCTC ACCCGCGCGG ACGCGATCAG CAAAGCCGAG
ATCATTTCCG AGGCCGACGT CGGCCGCGCC ATCGCCCTCA AAGAGCGGAT GGAGGAAGCG
CACAAGATCC TCGCCGACAA GTGGAAACCT ATCCAGAACG ACATAGCCGA ACTTGGTATC
AACTATCGCG AGAACACCTC TGCGATCGTT GAGAAGTTCG CCGAGTTGGT CGGCCTCGCC
AATCAGCTCT ATGCCTCGCT CAAGACCATC CCTGACATCT TCGCGGAGCT TGGCAATTCG
CCCATCTGGT CCCGCCTGAC CGAACTGACC GGCGCCCTGG GCCTAAATTC TGATCCGGCC
GCGCTTGGCA TCGAGACAGG AATCGACGTC GGCCGCGCCA CGGCGAATGA CAAGCTGCGG
GCGGCACTAC AGAACCGCGC TCGCATGATG CGCGACATGC AACAGGCTTC GGACGTGCAA
ACCGCCGTCC GCGGCGACAC CTCGCGCAAT CCGGCGCCGG CCAAGTCCGG CGAGGCGAAT
GCCTTCGACA CCACGGCGGC GTCGATCGAA CGCCACACCG CCCGCGTGCA GGCCGACACG
AAGGCGGTCG GCCTTGGGGC CGCGGCGCTG GACGAGATGC GCGCCCGTGC ATCGCTGCTT
ACGGCGGCAC AACAGGCCGG CATTGAACCG ACTGCGGCAA TGACCGCCCG GATCGACAAG
CTCGCCAAGG CGGCCGGCGA AGCGGCCGAA CAACTCGCCA AGGCCAAGGT CAATTCCGAG
ATCGACTTCG GCCGCAAGAC CGCGATGCTG TCGGGCGAAG ATGTCGCCAT TGCCGGCCAG
CTCCGATCGA TCTACGGCAA CGATGTCCCC ACCGCGCTCG CCAGCTCGGA AGCCGCGGCC
TTGCGCCTCA ACGAGGCTCT GAGGGGCTTG TCAGGCTCGA TTGAGACCAG CCTGACCAGT
GGCCTTGCCG ACATCGCTAC GGGCGCTAAG TCGGTCAGCG CCGGATTTGC CGACATGGGG
CGCGTCGTGA TCCGCGCGCT CGAGGAAATG ATCGTCAAGA TGCTGGTGGT GCAGCCGCTG
ATGCGCGCCT TATCCGGCGG CGTGCTCGGC TTCGCAGACG GCGGCCTGGT TTCCGCCCCT
TCCACGATGA TGATCGGCGA CTACGCGATG CCGAAGTTTG CCGGCGGCGG CATGATCTCC
GGCCCCGGCA CCGGTCGATC GGATTCCATC CCGGCGCTGG TCAGCAACGG CGAATTCATC
GTCAACGCCG ACGCCACGGC CCGGCACCTG CCGATCTTGA AGGCGATCAA CGAGAACGCC
CTTCCTCGCT TCGCAGACGG CGGCTTGGTC GGCAGCGGCG CGGCGCCCAT GATCAGCCCT
GGCGCGGTAG TGGCGCCGAC GGTGCAGGTG ACCGTGCAGG GCTCCCCCGG CATGACCGCG
ACCGATCACG AAGAGATGGG GCGGCGCGTC GGCGCGGCCG CGATGGATCA GATCCGCGGC
ATGATCGCCA AAGAATTCCG CACTCAGACC CGCCCCGGCG GCGCGCTTCG GCGATGA
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| Protein sequence | MAVPALNIPI RADVDKFQRD MNKAADVAGK ATMAITSKVI AMNSTFLASQ GAAGVATLAL
GRVLGVVGPL ALAITAVKDT FDFLRYSVKL AGDRIEEFNG IAAKAASANV TTDFYQRIEK
AAKGAGLSID DSADALRRFN DATSTKLGGS DLDKRLKELS DAGNLSGNRG LAQLSIATGT
EERIRTVVRL IDEAMQKGER LAAIDIAEKA FGSKVAANLK ADAGYLDQLL TRADAISKAE
IISEADVGRA IALKERMEEA HKILADKWKP IQNDIAELGI NYRENTSAIV EKFAELVGLA
NQLYASLKTI PDIFAELGNS PIWSRLTELT GALGLNSDPA ALGIETGIDV GRATANDKLR
AALQNRARMM RDMQQASDVQ TAVRGDTSRN PAPAKSGEAN AFDTTAASIE RHTARVQADT
KAVGLGAAAL DEMRARASLL TAAQQAGIEP TAAMTARIDK LAKAAGEAAE QLAKAKVNSE
IDFGRKTAML SGEDVAIAGQ LRSIYGNDVP TALASSEAAA LRLNEALRGL SGSIETSLTS
GLADIATGAK SVSAGFADMG RVVIRALEEM IVKMLVVQPL MRALSGGVLG FADGGLVSAP
STMMIGDYAM PKFAGGGMIS GPGTGRSDSI PALVSNGEFI VNADATARHL PILKAINENA
LPRFADGGLV GSGAAPMISP GAVVAPTVQV TVQGSPGMTA TDHEEMGRRV GAAAMDQIRG
MIAKEFRTQT RPGGALRR
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