Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3976 |
Symbol | |
ID | 6411658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4269511 |
End bp | 4270215 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642713858 |
Product | putative phage HK022 GP20-related protein |
Protein accession | YP_001992947 |
Protein GI | 192292342 |
COG category | [S] Function unknown |
COG ID | [COG4723] Phage-related protein, tail component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCGGA CCATTCATCT GCATGGCCGG CTCAAGACGC TTTTTGGCCC AAAGCACCGG TTTGATGTCC TCACAGCCGC AGAGGCGCTG CGGGCGCTCA ACTGCGCATT CCCCGGTGAA TTCGTCAAGG AACTGTCCGA GGGCGCCTAT TGCGTCGTCC GCGGTAACCG GCACTCGGGA ATGCAGCTCG ATATCGAACT GGTCACCAGC TTCAAGCTCG GCAATGCCGA TCTGCACATC ATTCCGGTCG CGGCCGGCGC CGCCAACGGC ACCAACAAAG CGGTAGGCAA GACCATCCTC GGCACGGTGC TTATCGGCGC CGCGGTGTTC ATGTCGGGTG GCGCTGCCGG CGGACTACTC GCCGGCATGG GCGCACAAGC CCTCACTGGC GTCGGTATCA CCTGGGGCAA CATCGCACTC GTCGGCCTCG GCCTGGCGCT CTCCGGCGGC GCGACGCTGC TCGCCAACGC GAGCGACCCC ACGACCAGCG ACACGAAGAC CGACGAGAGC TTCACGACCG CCGGTCCGAC CAATCTCGCG CAACAGGGGG CAGCAATCCC GCTGATCTAC GGCGAGACAA TGACCGGCTC CAATGTCATT TCGTTCGATG CCGACATCGA AGACATCAGG GCCTACCAGG ACGCCCAGGG CAGCATGGCC GACTACTACC TCGGCGCCTT CCAATATCGC GTGGGGAACT CCTGA
|
Protein sequence | MMRTIHLHGR LKTLFGPKHR FDVLTAAEAL RALNCAFPGE FVKELSEGAY CVVRGNRHSG MQLDIELVTS FKLGNADLHI IPVAAGAANG TNKAVGKTIL GTVLIGAAVF MSGGAAGGLL AGMGAQALTG VGITWGNIAL VGLGLALSGG ATLLANASDP TTSDTKTDES FTTAGPTNLA QQGAAIPLIY GETMTGSNVI SFDADIEDIR AYQDAQGSMA DYYLGAFQYR VGNS
|
| |