| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3965 |
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| Symbol | |
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| ID | 6411646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4256450 |
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| End bp | 4257244 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713846 |
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| Product | TonB family protein |
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| Protein accession | YP_001992936 |
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| Protein GI | 192292331 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACC CTGACCTCAA CCGCAATGGC ACCTACCGGC TCTGGCTGAT GGCCGCTGTC
GGCGCGGTGG CGTTGCATGT CGGAGGCGCC GCGCTGGCGC TGGTCAGCAT GCCGGAAGAT
GCCGACGACG ACGCGCTCGG CGCGCCGGCG ATCGAGGTCG GCGTCGAGAT GATGTCGCCG
AAGATCGAGG CGTCCGATCT GCCGCCGGGG CCGGACACCG AGGCGTCGAT GGCGTCGCCG
GCGCTCAACG AGCAGAAGGC CGAGGTCAAG GACTCCGACC TGCCGAAGGA CACGCCGCAG
GAGACCGAGG AGCCTGACCG CGTCGTCACC ACCGAGACGC CGAAGAAGGT CGACGAGGAG
CAGAAGGAAA AGGCGCAGCA ACAGCAGCAG GCCTCGACCG AGTCGGTCGC CGCCGAAGCC
ACCGCGATGC CGAGCAACGA GTCCGCCAAG GAAGGCCCGC GCTCGGTCGC GCCTGCGCAG
GGCGTCGGCA AGGCCGCCGC GCGCATCCGC GCTACCTGGC AGAAGGAGCT GGTGGCGTAT
CTCGACAAGC ACAAGCGCTA CCCGAAGGAA GCCGCGCAGA AGAACGTGCG GATCGTCGTT
GGCTTCGAAC TCGACCGCCT CGGCCACGTG CTGTCGATGC GGATCGTCGA AGGCTCAGGT
GACGCCGCCT TCGATCAGGC CGCGCTCGAC ATGATCAAGC GTTCCGACCC TGTTCCCGCA
CCGCCGCCGC TGATCGCCGA CGAAGGCCTG ACCTTCAGCC TGCCGGTGAT CTTCCGGACC
AAGGGGAAGG GTTAG
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| Protein sequence | MSDPDLNRNG TYRLWLMAAV GAVALHVGGA ALALVSMPED ADDDALGAPA IEVGVEMMSP
KIEASDLPPG PDTEASMASP ALNEQKAEVK DSDLPKDTPQ ETEEPDRVVT TETPKKVDEE
QKEKAQQQQQ ASTESVAAEA TAMPSNESAK EGPRSVAPAQ GVGKAAARIR ATWQKELVAY
LDKHKRYPKE AAQKNVRIVV GFELDRLGHV LSMRIVEGSG DAAFDQAALD MIKRSDPVPA
PPPLIADEGL TFSLPVIFRT KGKG
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