Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3943 |
Symbol | |
ID | 6411624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 4230106 |
End bp | 4230876 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642713824 |
Product | enoyl-CoA hydratase |
Protein accession | YP_001992914 |
Protein GI | 192292309 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATGC TCAACACCCA TTGCGGCGTC GACCGCGATT CCCGCGGCGT CGCGCGCCTC ACCATCTGCA ACGCTGGCAA ACTCAACATC CTGAACACCG CGGTGATCAC CAATGTGCGC GATGGGCTGC AGCAACTCGC AGCAGATCAG AGCCTGCGCG TGCTCATCAT CGCGGGACAG AGCGAACGCA GCATGATCGG CGGCGCCGAT ATCAACGAGA TGGCGACGCT CGATCAGAGT TCCGCCGAGC GCTTCATCAC CGGGCTTGCG GAGCTGTGCG AGGCGGTGCG CGCCGTGCCC TATCCGGTGA TCGCGCGAAT TCCCGGCTGG TGCCTCGGCG GCGGCCTGGA ATTCGCCGCC GCCTGCGATT TCCGTGTCGC CACGCACGAC GCCAAATTCG GCATGCCCGA GGTGCGGGTC GGGATTCCGT CGGTGATCCA CGCCGCCCTG CTGCCGCGGC TGATCGGCTG GTCGCGGGCG CGCTTCCTGG TGATGGCCGC CGAAAACATC GACGCCGATA CCGCTCTGGC CTGGGGCCTG ATCGACAAGA TCGCGCCGCC GGGCGAGCTC GATGCGGCGG TCGAGCATCT GGTCGGCGCT TTGCTCGCCG GCGCGCCGCA GGCGATGCGG GCGCAGAAGG CGCTGATGGC GGCGTGGGAA GACATGCCGC TGCCGCAGGC GGTTGCGCAT TCGGTCAAAG TGTTCGGCCA GTCGTATCTG ACCGGCGAGC CGCAGGCCCT GATGGCGGAT TTCATCAACC GCAAACGCTG A
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Protein sequence | MQMLNTHCGV DRDSRGVARL TICNAGKLNI LNTAVITNVR DGLQQLAADQ SLRVLIIAGQ SERSMIGGAD INEMATLDQS SAERFITGLA ELCEAVRAVP YPVIARIPGW CLGGGLEFAA ACDFRVATHD AKFGMPEVRV GIPSVIHAAL LPRLIGWSRA RFLVMAAENI DADTALAWGL IDKIAPPGEL DAAVEHLVGA LLAGAPQAMR AQKALMAAWE DMPLPQAVAH SVKVFGQSYL TGEPQALMAD FINRKR
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