| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3942 |
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| Symbol | |
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| ID | 6411623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4229388 |
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| End bp | 4229963 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713823 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001992913 |
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| Protein GI | 192292308 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
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| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGC TCGATGCCGC TGCGCCGCCC GATCTCGCTG GCTTGTTCGC GCCCGCGCAG
CGCCGCAGCC GCACCGTCGA CTGGCAGGAA CCGGGGCCGG TCGCCCGCGC CGCGATGGCG
ATGTCCGGCC TGGAGGTGAT GCAGGCGATC CGCGATGGCC GGCTGCCGCC GCCGCCGCTC
GCGCGACTGA TCGGCTTCAA GATGGCCGAA GTGCATCGCG GCCGGATTGT GATGCAGCTT
GATCCCGACC AGAGCCTGGA GAACACCGCG GGCCTGCTCC ACGGCGCGAT CGCAGCCGCG
CTGCTCGACA CCGCAATGGG CTGCGCGATC TCGACGCAGC AGCAGGCCGG GCAGGGCTCG
GTGACGATGG ATCTGAAGCT CAGCTATCTG CGGCCGCTGT CGGTGCGGTC CGGCACGATC
GTAGCCGAGG GGCGGGTGGT GAAGCTCGGG CGGCAGTCGA GCTACACCGA GGGCTTCGTC
TATGACGGCG CCGGCAAGCT GGCGGTGCAC GCCACTGCAA CTTTCGCGAT GCTCGGCGCC
GGGCCTGCTG CGGCGCCACA TCCGCACGAA TCCTGA
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| Protein sequence | MTMLDAAAPP DLAGLFAPAQ RRSRTVDWQE PGPVARAAMA MSGLEVMQAI RDGRLPPPPL
ARLIGFKMAE VHRGRIVMQL DPDQSLENTA GLLHGAIAAA LLDTAMGCAI STQQQAGQGS
VTMDLKLSYL RPLSVRSGTI VAEGRVVKLG RQSSYTEGFV YDGAGKLAVH ATATFAMLGA
GPAAAPHPHE S
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