| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3934 |
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| Symbol | |
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| ID | 6411615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4221264 |
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| End bp | 4222985 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713815 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001992905 |
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| Protein GI | 192292300 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGT TCCAGCAAGC CCGTGCCTTT CTGCTCCAAC ACCGCACCGA CTACGACAAG
GCCGTCGCCG GCTTCCGCTG GCCCGATCCG GCGCCGTTCA ACTGGGCGCT CGACTGGTTC
GATGCCGAAC TCGCGGCTAG TCCCGATAGC CGCGACCGCG CGGCGCTGTG GATCGTCGAC
GGCGCCACTG GAAGCGAGGT CAAGCCGACC TTTGCGCAGC TGTCGAAGCG CTCCAACCAG
GTCGCCAACT ATCTGCGCGC CAAGGGGCTG AAGCGAGGCG ATCATCTGCT GCTGCTGCTC
GGCAACGTCG TGCCGTTGTG GGAGACGATG CTTGCGGCGA TCAAGCTCGG TCTCGTCACC
ATCCCGGCGA CCACGTTGCT GACGCCGGAG GAGCTGCGCG ACCGGCTCGA CCGCGGCCGC
GCCAAGGCGG TGGTGGCGGC GCCGGATCAG GTCGCCAAGT TTACCGGCCT CGGCGGCGAC
GATCTGCTCC GCATCGTCGT CGGCGACGCG CAGGACGGCT GGCTCGCTTA CGCCGAGACC
GCACAGCAAC CCGATGCGTT CACGCCGGAC GGCCCGACGA AGGCCGACGA TCCGATGCTG
CTGTATTTCA CCTCCGGCAC CACCGCGAAG CCGAAGCTGG TGCGGCACAG CCAGCGCTCC
TATCCGGTCG GCGCGCTGTC GACGATGTTC TGGCTTGGGC TGCAGCCCGG TGACGTGCAC
CTGAACATCT CCTCGCCGGG CTGGGCCAAG CATGCCTGGA GCTGCTTCTT CGCGCCGTGG
AACGCGGGCG CGACGGTGTT CGTCGTCAAC CAGCCGCGGT TCGATGCCAA GAGCCTGCTG
ACCACGATCG GCCGCTGCGG CGTCACCACG CTGTGCGCGC CGCCGACGGT GTGGCGGATG
TTCATCCAGG AGAAGCTGGC GGACTATCAT GTCAGCCTGC GAGAGGTTTG CGGGGCCGGC
GAGCCGCTCA ATCCGGAAGT GATCGATCAG GTCAAGGCTG CGTGGGGGCT CACCATTCGC
GACGGCTACG GCCAGACCGA GACCACCGCG ATGGTCGGCA ATTCACCGGG CCAGAAGGTG
AAGATCGGCT CGATGGGGCG GCCTCTGCCG GGCTACGTCG TCAAGATCAC CGATGCCGAC
GGTCAGCCCG CCAAGGAAGG CGAGATCACG CTGGCGCTCG GTGACGCGCG CCCCGCCGGG
CTGATGCAGG GCTATCAGGG CGAGGGCGGC AAGCTCACGG GCGCAGACGG TGAGGTGTAT
CGCTCCGGCG ACGTCGCCTT CGCCGACGAG GACGGCTATC TGACTTTCGT CGGCCGCACC
GACGACGTGT TCAAATCCTC GGACTACCGG ATCTCGCCGT TCGAACTCGA GAGTGTGCTG
CTGGAGCACG ACCTCGTGGC CGAAGCCGCG GTGGTGCCGA GCCCGGATCC GATCAAGCTG
GCGATCCCGA AAGCCTACGT GCTGCTCACC GCGAACGCGG AGCGTTCGCG CGACACCGCG
CTGTCGATCT TCAAGCACAT GCAGGGCCGG CTGGCGCCGT TCAAGCGGAT CCGCAAGCTG
GAGATCGTCA GCGAGCTGCC GAAAACGATC TCCGGCAAGA TCCGCCGCGT CCAGCTCCGC
CGCATCGAGC ACGACAACGA TCAGGCCGAT AGCTTGCGCG GGCTCGCGTT CTCCGAAGAG
GACTTCCCGG AGCTGAAGGT CGCGCCGGCG AAGGATGGTT AG
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| Protein sequence | MTTFQQARAF LLQHRTDYDK AVAGFRWPDP APFNWALDWF DAELAASPDS RDRAALWIVD
GATGSEVKPT FAQLSKRSNQ VANYLRAKGL KRGDHLLLLL GNVVPLWETM LAAIKLGLVT
IPATTLLTPE ELRDRLDRGR AKAVVAAPDQ VAKFTGLGGD DLLRIVVGDA QDGWLAYAET
AQQPDAFTPD GPTKADDPML LYFTSGTTAK PKLVRHSQRS YPVGALSTMF WLGLQPGDVH
LNISSPGWAK HAWSCFFAPW NAGATVFVVN QPRFDAKSLL TTIGRCGVTT LCAPPTVWRM
FIQEKLADYH VSLREVCGAG EPLNPEVIDQ VKAAWGLTIR DGYGQTETTA MVGNSPGQKV
KIGSMGRPLP GYVVKITDAD GQPAKEGEIT LALGDARPAG LMQGYQGEGG KLTGADGEVY
RSGDVAFADE DGYLTFVGRT DDVFKSSDYR ISPFELESVL LEHDLVAEAA VVPSPDPIKL
AIPKAYVLLT ANAERSRDTA LSIFKHMQGR LAPFKRIRKL EIVSELPKTI SGKIRRVQLR
RIEHDNDQAD SLRGLAFSEE DFPELKVAPA KDG
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