| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3929 |
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| Symbol | |
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| ID | 6411610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4216147 |
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| End bp | 4217562 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713811 |
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| Product | amidase |
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| Protein accession | YP_001992901 |
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| Protein GI | 192292296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG GCCTCGCCAC CACCGCCACC GCGCTGCACG ACCTCTCGGC CACCGAACTG
CTCGCCGGCT ATTACGGCAA GCAGTTCTCG CCGAGCGAGG TGATGGAAGC GGTGATCGCC
CAGGCGACAC GCTGGGAGCC TCATATCAAC GCGCTGTACG GCTTCGATCC CGACACCGCG
CGCAAGGCGG CGCAGGCTTC GACCGCGCGC TGGGCCAAGG GCGAGCCGCT CGGCCTGCTC
GACGGCGTGC CGGTGACGAT CAAGGAGAAC GTCGCCACCG AAGGCGTGCC GGTGCCGCTC
GGCGTGCCGA TCACGCCGCT GACGCCGGCG ACGGCCGATG CGCCGCCCGC CGCGCGGCTG
CGCGAGGCCG GTGGCATTCT GTGGAGCAAG ACGACGATGC CGGATTTCGG CATGCTGTCG
TCGGGGCTGT CGAGCTTCCA CGGCGTCACC CGCAATCCGT GGGACGTGAC GCAGAACACT
GGCGGCTCCT CCGCCGGCGC CGGCGCCGCG GGCGCGGCCG GCTACGGGCC GCTACATCTC
GGCACCGATA TCGGCGGCTC GGTGCGGCTG CCGGCCGCGT GGTGCGGCAT CTTCGCGTTG
AAGCCCTCAC TCGGCCGCGT GCCGATCGAT CCGCCCTATG TCGGCCGCTG CGCCGGGCCG
ATGACCCGCA CCGTCGACGA CGCCGCGCTG ATGATGAGCG TGCTGTCGCA GCCCGACGGT
CGCGACGGCA TGAGCCTGCC GCCGCACGAT TTCGACTGGA GTGATCTCGA CACCACGCTG
CACGGCAAGC GCATCGGCCT GCTCACCGAT CTCGGCTTCG GCATGGCGCT GGAGGACGAA
GTGCGCCACA TCGTCACTGA GGCGGCGCGC ACGTTCGAGG CGCAGGGCGC GATCGTCGAG
CCGGTCGAAC TCGGCTTCAC CCGCGAGATG ATGGACGGGC TCGACAATTT CTGGCGAGCG
CGGATGTGGA GCGATCTGGC GCTGTTCTCC GACGAGCAGC GCGCCAAGGT GCTGCCCTAC
ATCGTGCGCT GGGCCGAGCC CGGCGCGCGG CTGACCGGCG TCGAGGTGGT ACGCGGATTC
AACCAGACCA TGGCGGTGCG CGCGCTCAGC GCCAAGCTGT TTGCCGGCAT CGACTATCTG
ATCTCGCCGG TGGCGCCGGT GGTGAGCTTC GCCGCCGACG TTGCTTCGCC TTGGAATGAT
CCAGACAAGC CGTTCGATCA CATCCTCTAT ACCGTGCCCT GGAATATGGC GGAGAATCCC
GCCGCTTCGA TCAACGCCGG CTACAGCACG AAGGGCTTCC CGATCGGCGT GCAGATCGTC
GGAAAGCGCT TCGACGATCT CGGCGTACTG CGCGTGGCGA AGGCCTTCGA AGGCTTACGC
GGTGAGCAGA AGCCGTGGCC GGTGGCGCCG CGCTAA
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| Protein sequence | MSDGLATTAT ALHDLSATEL LAGYYGKQFS PSEVMEAVIA QATRWEPHIN ALYGFDPDTA
RKAAQASTAR WAKGEPLGLL DGVPVTIKEN VATEGVPVPL GVPITPLTPA TADAPPAARL
REAGGILWSK TTMPDFGMLS SGLSSFHGVT RNPWDVTQNT GGSSAGAGAA GAAGYGPLHL
GTDIGGSVRL PAAWCGIFAL KPSLGRVPID PPYVGRCAGP MTRTVDDAAL MMSVLSQPDG
RDGMSLPPHD FDWSDLDTTL HGKRIGLLTD LGFGMALEDE VRHIVTEAAR TFEAQGAIVE
PVELGFTREM MDGLDNFWRA RMWSDLALFS DEQRAKVLPY IVRWAEPGAR LTGVEVVRGF
NQTMAVRALS AKLFAGIDYL ISPVAPVVSF AADVASPWND PDKPFDHILY TVPWNMAENP
AASINAGYST KGFPIGVQIV GKRFDDLGVL RVAKAFEGLR GEQKPWPVAP R
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