| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3918 |
|---|
| Symbol | |
|---|
| ID | 6411598 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 4203696 |
|---|
| End bp | 4204844 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642713799 |
|---|
| Product | putative exported protein of unknown function |
|---|
| Protein accession | YP_001992890 |
|---|
| Protein GI | 192292285 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTAC AACTCGGCGT GGCGAAGTTC TGCCTTGCAA TCAGCGCTGT GGCGCTGGTC
GCCGCTTGGC CGCACGCCCG CTACAGCGTC GCGGTGATGG TCGCTCAGAA CGATCCGGCG
AAACTATCCG ATCTGCAGAT CGCTGAGAGA TTGCGGCGGG ATCAGGGCAT GATCGCGCGC
CAGATCGAGG CTGCACTCGC CGCCGGCGAC GCTGATCTCG CGCGCAGCCT GGTCGAATTA
GCCGCCGCGC ATCAGGTCGC GTTGTCCGAC GAACTGACAC GGCGCGTTGA CAGTGCGGTC
GCTGCGGATC GCGCGCCTGC GCAGGTGGCG ACCCGTTTCG CGACCGGTCT TGTCACCGGC
CAGGCCGATG ATCTTGCCGG GCTGTCCGGC ACGATCACGG GCGATCTGTT CGTGTTCGGT
GATATCCGGG ACGTGATCCG CGAAGGCAAA CATCTGGCGA CCGGGGAGGA GGCCGATCAT
CTGGTGCTTG GGCTCGCGGC CGCGGGCATC GCGGTGACCG CCGCGACCTA CGTCAGCGTC
GGTGCGGCGG CGCCAGCGCG GGCTGGGCTG ACACTGGTGA AGGATGCGCG CAAGGTCGGA
CGTATCAGCG AGGGCCTCGC GAAATGGGCC GGTCGTTCGG CCCGCGAGGT CGTCGATGCG
CCGGCGTTGC AACGTGCCGT CGCCGACGCT TCGTTGCTTC GCCCCGCGCA AACGCTGGAT
GCCGTGAAGG CTGCGGTCCG CACTGAGAAA GCCGGCGGTC TGATGCGGTT CGCCAAGGAT
GTCGGCAAGA TCGGCGACAA GGCGGGTACC CGCGGCGCGT TCGATGCGCT CAAGGTTGCC
GAAAATCCGA AGGATGTGGC GCGTGCCGCG AAACTCGCCG AAGCCAAGGG CGGTCAGACC
CGGGCGATCA TCAAGTTGTT GGGGCGTGGA GCTTTGTTGC TCACGACCGG TGCTTGGAAT
TTCGCATCGT GGATTTTCAG TGCGCTGCTG ATGTTGATCG GCTTCGTCAT CTCGCTGAAG
TCCGGCACCG AGCGGTTGAC GCAGCGCTGG CTCGATCGCC GTAAACGCAA GGCGGCCAAA
CGCGCGCTCG CCGCAACGAA ACAGCCCCAG CCGCCCATCG GCGCGGCATC TGCCGTGGCC
CAGGCATAG
|
|---|
| Protein sequence | MRLQLGVAKF CLAISAVALV AAWPHARYSV AVMVAQNDPA KLSDLQIAER LRRDQGMIAR
QIEAALAAGD ADLARSLVEL AAAHQVALSD ELTRRVDSAV AADRAPAQVA TRFATGLVTG
QADDLAGLSG TITGDLFVFG DIRDVIREGK HLATGEEADH LVLGLAAAGI AVTAATYVSV
GAAAPARAGL TLVKDARKVG RISEGLAKWA GRSAREVVDA PALQRAVADA SLLRPAQTLD
AVKAAVRTEK AGGLMRFAKD VGKIGDKAGT RGAFDALKVA ENPKDVARAA KLAEAKGGQT
RAIIKLLGRG ALLLTTGAWN FASWIFSALL MLIGFVISLK SGTERLTQRW LDRRKRKAAK
RALAATKQPQ PPIGAASAVA QA
|
|---|
| |