| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3861 |
|---|
| Symbol | |
|---|
| ID | 6411541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 4148752 |
|---|
| End bp | 4149297 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642713743 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001992834 |
|---|
| Protein GI | 192292229 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCGGA TCGACTTCAA CAAGCTGCGC TTCCTGATCT GCGACGACAA TCCGCACATG
CGGCGCATCC TGCGCACGCT GCTGCACTCG TTCGGCACCC GTGAAGTCTA CGAGGCCGAG
GACGGCGCCA CCGCGCTGGA AATGTACAGC CACTATTCGC CCGACATCCT GATCACCGAT
TGGGAAATGC CGATCTTCGA CGGGCTGGAG CTGGCGCAGA TGATCCGGCA GCCGGAGGCC
AAGGGCAATC CGTATGCGCC GATCATCATG CTGACCGCGC ATTCGGAAAA GCGCCGCGTG
ACGCTGGCGC GCGATGCCGG CGTCACCGAA TTCCTCGCCA AGCCGATCTC GTCGAAGGGC
CTGTATCAGC GCATCCTCAA CGTGGTGGCG AGCCCGCGCC CGTTCATCCG CACCCGCAAC
TACTTCGGCC CCGACCGCCG CCGCAACACC ACCGCCGGCT ATATCGGCCC GGAGCGGCGC
CACGGGGGCG AAGCGGACAT CATCCAGCAG CCGTCGCTGC TCGATAAGGC CCGGGTCAAC
ACCTAG
|
|---|
| Protein sequence | MYRIDFNKLR FLICDDNPHM RRILRTLLHS FGTREVYEAE DGATALEMYS HYSPDILITD
WEMPIFDGLE LAQMIRQPEA KGNPYAPIIM LTAHSEKRRV TLARDAGVTE FLAKPISSKG
LYQRILNVVA SPRPFIRTRN YFGPDRRRNT TAGYIGPERR HGGEADIIQQ PSLLDKARVN
T
|
|---|
| |