| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3802 |
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| Symbol | |
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| ID | 6411480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 4079396 |
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| End bp | 4082080 |
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| Gene Length | 2685 bp |
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| Protein Length | 894 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642713683 |
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| Product | type III restriction protein res subunit |
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| Protein accession | YP_001992776 |
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| Protein GI | 192292171 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGC GGCAGGTTCA GCAGATCAAA GCGCGGCTTT CTCTCCGGAA ACCGCAGTCT
GAAGCGCTCG ACATCCTCGC AGACGTACTC GAAACAATCG ATTTTTCGAA AGACGCTGAT
GTTGCTGCTG CCCTTGGGGC GGTCAAGGCC ACTTATCCGA ATGTCACCGA TTTCGAACGG
CAGTTTCCGT CGCTGTGCTT CGCGCTCGCC ACCGGCGTCG GAAAGACCCG CCTGATGGGC
GCATTCATCG CCTATCTCTA TTTGACCGGT CGATCGAAGC ACTTCTTCAT TCTCGCCCCG
AACACAACGA TCTATGACAA GCTGGTCGCC GACTTCAGCC AGCAGAACTC TTCAAAGTAC
GTCTTCAGGG GCATTGCAGA ATTTGCGCAG CTTCCGCCCA TCGTGGAGAC CGGCGACAAC
TGGGAACGCG GCTACGCCGT GCGGGGCGAT CTTCTCGGCG ATACGGCGGT GGTCTTCATC
TTCAATGTCG ACAAGATCAA CAAGGAGCAA GGCCGCATTC GCAAGCTCCA CGAGTATATC
GGGCAAAGCT ATTTCGACTA TCTGTCTGGT CTACCCGATC TTGTGCTCTT GATGGACGAG
GCGCATCGCT ACCGGGCCAA GGCGGGCATG GATGCGATTG CGGAGTTACA CCCCGTTATC
GGCCTCGAAT TGACGGCGAC GCCTCGCTCG GTCGGCGCGC GGTCTACAGC CTTCAAGAAC
GTGATCTATG ACTACCCGCT CGGCCAGGCG ATGGTGGACG GCTATGTAAA GGACCCGGCC
GTTGCGACCA GGGAAGGATT TCGAGCCGAC AGCGTCAGCC TCGAACAGCT TGAACGTATG
AAGCTGGAAG ATGGCATCCA CTGCCACGAG CACACCAAAG CAGAATTGGC TATCTACTCG
CAGCAGACCG GTCGAAAGCT GGTCCATCCG TTCATGCTGG TCGTTGCGCA GAATACCGGC
CATGCCAGCG ATATCCGGAA ATACATCGAA TCCGATAAGT TCTTTGAGGG ACGCTACAAG
GGACGCGTGA TCGAAGTTCA TTCCGGAACA AGGGGCGAAG AAACCGACGA AGCGACCACC
CGGCTTTTGG CGTTGGAGTA TGACTCACAA ACCGACATTG TGGTCCATGT GAACAAGCTC
AAGGAAGGTT GGGACGTAAC CAACCTCTAC ACCATCGTCC CCTTGCGCGC CTCGGCATCG
GACATCTTGA CGGAGCAGAC GCTCGGACGC GGTCTTCGAT TGCCGTATGG CCAGCGGACG
GGCGTGGAGG CCATCGACAG ACTGACAGTC GTTGCCCACG ATCGATTCGA TGACGTGATC
AAAGCCGCGC GTGATCCTGA TTCGCTGATC TCAATCCGCA AGACCGTGAT CGTCGGCGGC
ACCGGTGACG TCTCTAACGA GGGTGCGCAC GTTATCGAAT CCCCTTCGAA TCTCGAAACG
TCTCTGACCG GTACGGGCCG ATCGTTCGAG GAATCCGAAC AACGGCCATA CGTGTTCGAA
ACTCCGGAAG AGCGTGAAGT CGCAAAAGTG ACTTGGGAGG TGATCGAGCG GGAGTTCGAG
CGCAAGATCA AAACTGGCAT TGAAAAGCTC GAAGCCCCCG AGATTCAGGC GGAAATCACG
CGAATTGTGA AGGAGGTCAT GTCCCCCGAA CAAGGAGCGT TCGAACTTTC CGAACAAAAA
GCCGATGTTG CGGCTACTGT TGCGAAGGTG ACGAAGCAGC TCGTCATGAA CACCATTTCG
ATTCCCGAAA TTGTTGTGCT GCCGACGACC GACGTGAACT TCGGCTTTAA GGATTTCGAT
CTTTCGAATC TCGAAGCGAT CGCCAAGCAG CCGCTGACCG ACCAGATCAT GGTGCAGCGT
CTGAGAGACG AGTCGCGCGC ATTCCTCGCC CGCACGGTGG AGGGTATCAA GGAGGAGCGC
CCCGAGAACT ACCTCGTCCG GCAACTCATG GATTTGCCGC AGGTGGACTA TGAGACCCAG
AGCGAACTTC TGTTCAAATT GTCCGGGCAA ATGGTGAGGC GGCTGGAGGC TTATCTCAAG
ACACCCGAGG ACGTTGAGAA CGTCCTTATC GTCCACGGCA AGGACCTCGC GCGGTTCATC
TTCGGACAGA TGCAGGACCA CTACTGGGAG ACGGCAACCG ACTACCGGGC GAGTGTGTCG
CGGGGCTTCG TGATGCTCAA GCCGCAAGCC TACAACGTCC CCAGCGAGGC CTTCGTTCGA
AATTTTCGAA CGCCTATCAA CCCGCTCAAC TTGACCCCGA AGTACGTCTT CGAGGGCTTC
GCGAAGTGCT GCTATCCGTA TCAGAAATTT CAGTCCGACA CTGAGCGTGA ATTCTCCGTT
ATCGTGGAAG CGAAGAGCGA GACCGGCGTC TTACGTTGGA TGAAACCGGG CAGCGGTCAA
TTCCGGATCG AATATGCGTC GGGACAGGCA TACGAACCAG ACTTCGTGGT TGAGACGGAG
AAGGACAAAT TTATTGTCGA GACTAAGGCG AACGGCGAAT TGAGCGATCC GGTCGTTCAA
GCAAAAGCGA AAGCCGCCCG GAAATGGGTC CATCATGCAA ACGAGCATGC GAAGGAAACG
GCCGCAAAGC CGTGGACCTA CGTGTTGATC CCGCATGATG CAGTCAAACC TAGTGCAACA
CTGGCTTCTT TGGTCTCCGC ATATGCCCAA TCTGAACTGC TTTGA
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| Protein sequence | MLQRQVQQIK ARLSLRKPQS EALDILADVL ETIDFSKDAD VAAALGAVKA TYPNVTDFER
QFPSLCFALA TGVGKTRLMG AFIAYLYLTG RSKHFFILAP NTTIYDKLVA DFSQQNSSKY
VFRGIAEFAQ LPPIVETGDN WERGYAVRGD LLGDTAVVFI FNVDKINKEQ GRIRKLHEYI
GQSYFDYLSG LPDLVLLMDE AHRYRAKAGM DAIAELHPVI GLELTATPRS VGARSTAFKN
VIYDYPLGQA MVDGYVKDPA VATREGFRAD SVSLEQLERM KLEDGIHCHE HTKAELAIYS
QQTGRKLVHP FMLVVAQNTG HASDIRKYIE SDKFFEGRYK GRVIEVHSGT RGEETDEATT
RLLALEYDSQ TDIVVHVNKL KEGWDVTNLY TIVPLRASAS DILTEQTLGR GLRLPYGQRT
GVEAIDRLTV VAHDRFDDVI KAARDPDSLI SIRKTVIVGG TGDVSNEGAH VIESPSNLET
SLTGTGRSFE ESEQRPYVFE TPEEREVAKV TWEVIEREFE RKIKTGIEKL EAPEIQAEIT
RIVKEVMSPE QGAFELSEQK ADVAATVAKV TKQLVMNTIS IPEIVVLPTT DVNFGFKDFD
LSNLEAIAKQ PLTDQIMVQR LRDESRAFLA RTVEGIKEER PENYLVRQLM DLPQVDYETQ
SELLFKLSGQ MVRRLEAYLK TPEDVENVLI VHGKDLARFI FGQMQDHYWE TATDYRASVS
RGFVMLKPQA YNVPSEAFVR NFRTPINPLN LTPKYVFEGF AKCCYPYQKF QSDTEREFSV
IVEAKSETGV LRWMKPGSGQ FRIEYASGQA YEPDFVVETE KDKFIVETKA NGELSDPVVQ
AKAKAARKWV HHANEHAKET AAKPWTYVLI PHDAVKPSAT LASLVSAYAQ SELL
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