| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3766 |
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| Symbol | |
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| ID | 6411444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 4043534 |
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| End bp | 4045282 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642713647 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_001992740 |
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| Protein GI | 192292135 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGTCG AGAACCTTGC TCATTTCAGC GCCGATACTC GTTTTGAAGC CGACCTCGTC
ATTATCGGAG GCGGCCCAGC AGGTCTCACA GTAGCGCGCG AGCTGCGAGG TGCTCCGCTA
CGCGTCCTGA TCGTCGAGAG CGGGCTGCTT GAGGAGGCTC CTCAAGCAAA CGAACTCTCC
ACGCTGGAGA GCATCGGCGA GCCGAACGCC CCGCACCAGA TTCAGAAGAG GATTGCTTTT
CACGGCGCCA ATTGCCGTTC CTGGACTCAG GACCAGCAAC CTTATGGTGT CCGTTGTCGA
GCGCTCGGAG GCTCGACCCA TGCTTGGGCG GGAAAGTCAG CCGCCTTCGA CGACATCGAT
TTTCAGGAGC GGGCATGGGT ACCGCATTCC GGCTGGCCGA TGGACCGATC CAGCCTCGAT
CCGTTTCTCG ATCGAGCAGC CGATATTCTG AACCTCGGAC CGAACCGTTA CGACGACACC
CTTTGGACTC TGCTCGGCAT TTCGCCTCCC GAACCTCAAC TCGGCACGCA GGGGCTTCGC
TCGTTCTTCT GGCAGTTTTC GCGATCCCGG GTCGATCCTC TCGACATTAT GCGGTTCGGT
GCCGACTTTC TCAGGTTGGA AGCCGACAAC ATTCGCGTTC TGCTCAACGC GACCGCGACG
CGCCTCGATC TGACCCAGGA GGGAGACGGG TTTCGCGGAC TGGAGATCGC GACGAACGAC
GGGCAACGCC ACACCGTTCA CGCAAAGGCG GCCGTGATCG CCGGCGGCGG TATCGAAAAT
GCGCGCCTTC TGCTCGCGTC AACCACGATC CACGCCAATG GAGTCGGCAA TCAGTACGAT
CTGGTCGGGC GCTTCCTGAT GGATCACGCC GGCGCGCGGA TCGCCAGGTT CGGCGGATCG
AACGCCAACC AGATCATGCG GCGTTTTGGA TTCTACGGCC TCCGCAATAG CGGCCGCACC
TCCATGTACA TGCACGGCCT CGCCATCACG CCTGAGTTGC AGGAGCGAGA ACATCTTTTG
AATTCGGCGA TCTATTTCAT GCCGGAGCAT GCGGCGGACG ATCCATGGGA CGCCGTCAAG
CGGCTTCTTA CCGGCAAGAG CAAGCGACAG GTCAAGGATG CCATGCGGGC CATCGCCGGC
GCCGGCCTCC TTGGAAAGGG CGCCGCCATG AAGCTGCTGT CCAGCGACCG GCTCCCAGTC
GCTGTCAAGG ATTTCATCGT CCAAACTGCC ATTCGATACA TGCCTAATGT GGCCGCGGAC
GACTTCCTCA GTCGCGGCGT TCCACACAAG GTGACGGACG TGTGGATCGA CGCCATATCC
GAGCAGCAGC CCGATCCCAA CAGTCGCATC ACGTTGTCAG AGAAGACAGA CCGGTTGGGC
CTGCCGCTTG CTCGGGTCAA TTGGAAGATC AACGCTGACG AGCGCCGAAC CATCATGCGG
CTCGGCCACA TCGTGGAGTC GGCTTTTGCG CAAGCGCGGC TACCGAAGCC GATCCTGGAA
CCATGGGTCG CGGAAGGCGC GTTCAACGAC GCTGTGATCA TCGACATGGC GCACAGCATG
GGAACGACGC GGATGTCGGC GTCGGCGCGA TCAGGCGTGG TCGACGAACA GTGCCAAGTT
CACGGCGTTC GCGGCCTCTA CATCGCCGGC AGTTCGATCT TCCCGACCAG TGGCCACGCC
AATCCAACTC TTATGATCGT GGCCTTTGCG GTCCGTCTTG CCGACCGTAT CCGACAGACC
CTCCTATAG
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| Protein sequence | MLVENLAHFS ADTRFEADLV IIGGGPAGLT VARELRGAPL RVLIVESGLL EEAPQANELS
TLESIGEPNA PHQIQKRIAF HGANCRSWTQ DQQPYGVRCR ALGGSTHAWA GKSAAFDDID
FQERAWVPHS GWPMDRSSLD PFLDRAADIL NLGPNRYDDT LWTLLGISPP EPQLGTQGLR
SFFWQFSRSR VDPLDIMRFG ADFLRLEADN IRVLLNATAT RLDLTQEGDG FRGLEIATND
GQRHTVHAKA AVIAGGGIEN ARLLLASTTI HANGVGNQYD LVGRFLMDHA GARIARFGGS
NANQIMRRFG FYGLRNSGRT SMYMHGLAIT PELQEREHLL NSAIYFMPEH AADDPWDAVK
RLLTGKSKRQ VKDAMRAIAG AGLLGKGAAM KLLSSDRLPV AVKDFIVQTA IRYMPNVAAD
DFLSRGVPHK VTDVWIDAIS EQQPDPNSRI TLSEKTDRLG LPLARVNWKI NADERRTIMR
LGHIVESAFA QARLPKPILE PWVAEGAFND AVIIDMAHSM GTTRMSASAR SGVVDEQCQV
HGVRGLYIAG SSIFPTSGHA NPTLMIVAFA VRLADRIRQT LL
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