Gene Rpal_3726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3726 
Symbol 
ID6411403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3987269 
End bp3988045 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID642713607 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_001992701 
Protein GI192292096 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.452007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGG TTCTGTCGGA GCGGCGCGGC GCCGTCACAG TGCTGACACT GAACAACCCG 
GCGCAATACA ACGCGATGCG CCGCGGCCTG CTCGGCGATC TCGGCACCGC ATTGAACGCG
GCGCTCGCCG ACGACGCGGT GCGCTGCATC CTGCTGACCG GCGCCGGCAA AGGCTTCTGC
GCCGGCGCTG CGCTCGGCAG CGAGACCTTC GAAGCCGGCG CCGAGGTCGC GCCGTGGATG
CGTGCCGAAC TCAGCCCGGT GCTGGAGGCG ATGCGCGGCG CCGCGAAGCC AATCGTCGTC
GCCGTCAACG GCCCCGCGGC CGGCGCCGGC GTCGGTCTGG CGCTTGCCGG CGACATCGTG
CTGGCGGCGC GCTCGGCGAA ATTCGTGCTG AGCTTCGTCA AGCTCGGCGC CGCGCTCGAT
GCCGGCACCT CGCTGTTCGT GCAGCGCGCG ATCGGTGTCG CCCGCGCCCG CGCACTGGCG
CTGCTCGGCC GTCCGCTGTC CGCCGAACAA GCTGAGCAAT CCGGCCTGAT CTTCCAGGCG
GTCGACGACG ATCGCCTGAT GGACGAAGCG ATGGCGATCG CCGAGCAACT CGCGGCCGGC
CCACCGATCG GCATCGGCCT GATCAAGCGC CAGATCGAAG CGGCATGGAG CGCCCCGCTC
GCGCAGGTGC TGGACGACGA AGCCGAGCAA CAAGGCCGTG CCTTCGTCAC CGCAGACCTG
CGCGAAGGCG CCGCCGCCTT CGTCGAGAAA CGCGCGCCGA ACTTTACCGG GCGCTGA
 
Protein sequence
MTLVLSERRG AVTVLTLNNP AQYNAMRRGL LGDLGTALNA ALADDAVRCI LLTGAGKGFC 
AGAALGSETF EAGAEVAPWM RAELSPVLEA MRGAAKPIVV AVNGPAAGAG VGLALAGDIV
LAARSAKFVL SFVKLGAALD AGTSLFVQRA IGVARARALA LLGRPLSAEQ AEQSGLIFQA
VDDDRLMDEA MAIAEQLAAG PPIGIGLIKR QIEAAWSAPL AQVLDDEAEQ QGRAFVTADL
REGAAAFVEK RAPNFTGR