Gene Rpal_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3723 
Symbol 
ID6411400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp3985535 
End bp3985981 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID642713604 
Producthypothetical protein 
Protein accessionYP_001992698 
Protein GI192292093 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.575869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATC AATCCGCTGT CGGTCGCCGC TTCACGCCGG TGACCGCCCA TGTCGAAGCC 
GGCCGGCTTC GCTATTTTCT CGACACCCTC GGCGAGACCA ATCCGGTGTA TCGCGACGCC
GCCGCGGCCA AGGCCGAAGG CTTCGCGGCG CCGCCGATCC CGCCGACATA TCTGTTTTGC
CTCGAGATGC TCGACAATGA AAACCCGTTC GAGTTTCTCA CCGCGCTTCA GATCGATCTC
GGCCGAGTAC TGCACGGCGA ACAGAGCTTC ACCTACCATG CCCCGGTGAT GGTCGGCGAC
ACGCTGACCT ACAGCCCGCA GGTCACCAGC GTCACTGACA AGAAGGGTGG CGCGATGACG
CTGATCGGCG TCGAAACCAC CGTCACCAAT CAGCACGGCG TCCACGTCGC CGATACGACG
CGGACCATCG TGGTGCGCAA CGGATGA
 
Protein sequence
MVDQSAVGRR FTPVTAHVEA GRLRYFLDTL GETNPVYRDA AAAKAEGFAA PPIPPTYLFC 
LEMLDNENPF EFLTALQIDL GRVLHGEQSF TYHAPVMVGD TLTYSPQVTS VTDKKGGAMT
LIGVETTVTN QHGVHVADTT RTIVVRNG