| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3685 |
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| Symbol | |
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| ID | 6411361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3936272 |
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| End bp | 3938335 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713565 |
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| Product | amine oxidase |
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| Protein accession | YP_001992660 |
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| Protein GI | 192292055 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.336746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGACC TTGCAATCGT AGGTGGCGGC CCGGGCGGTT TGATGAGCGC CTGGTATCTC
AAACGAAAGC TCGGGGGCCT GTGCAAGGTC ACCATCTTCG AAGCCTCCGA TCGGCTCGGC
GGCAAGATCG TCACCCAGAA ATTCGAAACC GCGCCGGCGA TGTACGAGGC CGGCGTCGCC
GAGTTGTACG ACTACTCGAT GACCGGTCCG GATCCGCTGC GGGAATTGGT GCAGCACTTC
GGCCTGCAGA CCATTCCGAT GGATGCCGAG CAGGTGCAGC TCGACGGCGA GCTGCTCAAT
GACGTTCCCG GCATGCGCAA GAAGTACGGC GACAAGACCG CCGAGGCGAT CGTCGCGTTC
CGCAAGAAGT GCACCGAGCA GATGACGCCG ACCCAGTATT ACGAGGGCGT CGGCGCGCAC
GACAACGAAC ACCCCTGGGC CTGGACCAAT TGCGAGCAAC TGCTCGACAA GGAAATCGAG
GACTCCACCG CCAAGCGCTT CTTCAAGGTG ATGGCGAAGT CCGACATCGC CACCGAGAGC
CACAACACCA ACGGCCTCAA CGCGCTCAAG AACTTCGTGA TGGATATCGA CGGCTATATC
GGCCTGTATT CGATCCAGAA CGGCAACGAG CAGCTGATCG AGTGCCTGCG CTCGGAGATC
GACGCCGACA TCCAGTTCAA TCACCGCGTC CTCAAGGTCG GCAAGACCGA GAGCGGCCGC
TATGAGCTGA ACATGATGAA CGGCAAAGGG CCGGAAACGC GCGACTTCGA TCTTGTGCTG
ATGTGCCTGC CGCACAACTG GCTCGCCACC CTGAGCTGGG GCAACGAGCA GCTGCGCAAG
GCGATGGTCA AGCACGTCTC CTATTTCGAT CGCCCGGCGC ACTACCTGCG GATCTCGATG
CTGTTCGATT CCCCGTTCTG GGGCGACAAG ATCCCGGGCT CCTGGTTCAT GTCGGAAGCG
TTCGGCGGCT GCTGTGTTTA CAACGAAGGC TCGCGCCACG ACGTTGGCAA ATACGGCGTG
CTCAACTTCC TGATCGCCGG CTCGGACGCG CTGGCGTTCT CCAACCTCAC CGACAACGAG
CTGATCGAGC TGGCGCTGAA GTCGCTGCCG GCCGAGCTCG GCGACGTCCG CGGGCATTTC
CTCGAGGGCA AGACCCATCG CTGGCTGTCG TCGGTGAACT GCATCCCCGG CGGCCTGCCG
GTGCGCGATG TGATGACCAA TCATCGCCCC GAGCCGAAGA ACCATCCGGG CTTCGTGATC
GTCGGCGACT ATCTGTTCGA TTCGACGCTG AACGGTCTGC TCGACTCCTC GGACGCCGCC
ACCGACATCA TCGTCACCGA GACGATGAAG CTGCGCCGCG CCCGCGCCCA GGACGGCAAG
CCGGTCTCCG ATAAGATCGA CCGCGACTAT TTCGAGAACT ATCGCAACCA GGGCCCGTAT
CGCGAAGTCT GGAGCCGGTT CACCAATCCG GACTATCTGA TCCAGACCAT CAAGACGGTG
TGGGACAAGC CGGGCGGCTA CAAGCTGCTG GTCGCCGGGT CCGCCAGCGG CGAGCTGGTC
GGCGCGCTGC GCGAGCGCGG CATCGATGCC TACGGCGTCG AGAACAACCG CTACATCCAC
GGCAAGACCC CGGAGGCGCT GAAGCCCTAC AACAAGCTCG GTTCGGTCGT CGAATTGCCG
TTCGAGGACG AAGAGTTCGA CTTCGTGTTC GAGACCAGCC TGTGCCACCT CGCGGAGAAC
CGCGTCGTCA AGGCGATCCG CGAGCTGCAC CGTGTCGCGC GCACCGGCGT GATATTCGGC
TCGGTGACCA GCGACATGGA TCCGGGCGTG ATCGACCGCT ACGACCTGCT GCGCGGCGTC
AAGAAGCTCG GCACCTGGTG GGAGTGGTCG GAGCTGTTCT TCAACAACGG TTTCGATCTG
TCGGTGCATC GCAACGATTG CGGCGACGCC CTGTGGGAGC TGGCGGTGAA GGCGGGCAGG
GGCCCGGGCC AGTGGTACAG CGACGCCGAC AGCCTGCGCT ATTCGTTCTT CGACAAGGTC
GACGACGAAG CGGACGGCGA CTAA
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| Protein sequence | MFDLAIVGGG PGGLMSAWYL KRKLGGLCKV TIFEASDRLG GKIVTQKFET APAMYEAGVA
ELYDYSMTGP DPLRELVQHF GLQTIPMDAE QVQLDGELLN DVPGMRKKYG DKTAEAIVAF
RKKCTEQMTP TQYYEGVGAH DNEHPWAWTN CEQLLDKEIE DSTAKRFFKV MAKSDIATES
HNTNGLNALK NFVMDIDGYI GLYSIQNGNE QLIECLRSEI DADIQFNHRV LKVGKTESGR
YELNMMNGKG PETRDFDLVL MCLPHNWLAT LSWGNEQLRK AMVKHVSYFD RPAHYLRISM
LFDSPFWGDK IPGSWFMSEA FGGCCVYNEG SRHDVGKYGV LNFLIAGSDA LAFSNLTDNE
LIELALKSLP AELGDVRGHF LEGKTHRWLS SVNCIPGGLP VRDVMTNHRP EPKNHPGFVI
VGDYLFDSTL NGLLDSSDAA TDIIVTETMK LRRARAQDGK PVSDKIDRDY FENYRNQGPY
REVWSRFTNP DYLIQTIKTV WDKPGGYKLL VAGSASGELV GALRERGIDA YGVENNRYIH
GKTPEALKPY NKLGSVVELP FEDEEFDFVF ETSLCHLAEN RVVKAIRELH RVARTGVIFG
SVTSDMDPGV IDRYDLLRGV KKLGTWWEWS ELFFNNGFDL SVHRNDCGDA LWELAVKAGR
GPGQWYSDAD SLRYSFFDKV DDEADGD
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