| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3684 |
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| Symbol | |
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| ID | 6411360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3934008 |
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| End bp | 3936152 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642713564 |
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| Product | ABC transporter related |
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| Protein accession | YP_001992659 |
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| Protein GI | 192292054 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCA AGCCCAATCC TCCCGTCACC CCGGACTCCC GGCCGGACGA CAAGTCTGCC
GCCACGCCGC CGGCCGATGC TGCCGCCGGC AGTCCTCCGC CCGGCAGTGA AGGCGCTGTC
CCCCCGGCTT CGCCGCTCGA CGAGAAGTTC GCGCTTCCGG TCGGCGCCGC GGCGCCGGTG
GTGCCGACCA CCAAGCCTCC GGTGAAGCAA CTGATCGCCG ACAAGGTCCC GGCCGCTCCG
GTGCCCGGCG CCAAGGCCGC CGCCGCGGAC GACGGCGACG ACGACGATGA GGACGACGAG
GACGACGACG AGGAAGATGA CGACGACGAT GAGGACGAGG AACTCGTCGT CTTCACCGCG
CGCGAGGCCG CCGGCGCACT CGCCACGATC GCCGGCTTCA TCCGGCCGGT CGTCGCCAAC
TACAAGAAGA TGCTGGCGTT CGTGGTGTTC GGCGTGGTCG TCGAAACGCT GTTCAACGTC
ATCATGCCGC TCAGCCTGAA GTTCCTGATC GACGACGCGC TCGGCGAGGA GGACTTCCAC
GAACTCTACA AGATCCTGTC GATCCTCGGC GTCGCCGGCG TCATCACCTC GATCATCGCG
GTGTGGTACG AGCGCTGGGA CGCCCGACTC TCCGCGGCGG TGATCTCCGA CGTCCGCACC
CGGCTGTTCG AGCACACCCA GCGCCTGCCT GCCGGCTACT TCGCCCGCAC CAAGCGCGGC
GAGATCCTGT CGCGGTTCTC GATCGACATG GCGGCGTTCT CGCGGGTGGT CGAGATTCTC
GCCAACACCG CGCTGTTGCC GTTCCTCGAG CTGATTGCCG GCATCATCCT GATGCTGTTC
CTGAACTGGC AGCTCGCCGT GGTGGCGCTG TTGATCTTCC CGATCACGCT GATCGGGCCG
CGCATTCTGA CGCCCAAAGC GGTGCAGGCG AACTACGAGC AGAAGGTGCA GGAAGCCGGG
CTGCTCGGCC TGCTGCAGGA AAACGTCGGC GCCCAGGCGG TGGTCAAGGC GTTCAGCCTG
CAGCGCAAGA TGTTCGGCTT CTTCTCGCTG CGCAATCAGG CGACGCGGCA GAAAATGGGG
CAGGCCACCT TCCTGACCTC GATGGTCGAG CGCAGCGTCA CCGTCTCGGT GCTGATGCTG
CATTTGCTGG TGCTGGCGCT CGGCGCCTAT CTGGCGACCA CCGGCCAGAT CACGGTCGGC
ACCTTCGTCA CCTTCGAGAG CGCGTTCTGG GAGGTGTCGT ACAACATCGC GCATCTGATG
CAGTTCATCC CGGTGTCGAT CCAGGCGGCC GCCGCCGTGC GCCACATGCA GGAGCTGCTC
GACGAGAAGA CCCCGATCTC CGACAAGCCG GGCGCCGCCG AGATGCCGCG CATCGTCGAC
AACATCGCGT TCGAGCGGGT GTCGTTCGCC TACGAGGGCG CCGAGCAGCC GGTGATCGAC
AATCTTAGCC TCAAGCTGAA GGCCGGCAAG ACCATCGCGA TCGTCGGCCC GAGCGGCTCG
GGCAAGAGCA CGCTGCTCAA CATGGTGCTG CGGCTGTACG ATCCGACCGA AGGCCGGATC
TCGATCGACG GCGTCGACAT CCGCAACGTC ACGCTGGAGT CGCTGCGCCG GAGCATGGCC
GTGGTGTTCC AGGAGAACAT GCTGTTCAAC ATGTCGATCC GCGACAACAT CCGGCTCGGC
AAGGAAGGTG CGACCGACGC CGAGGTCGAG CAGGCGGCCA AGAAGGCGGA GATCCACCGC
TACATCATGA GCCTGCCGCA GAAGTACGAC ACCGTGGTCG GCGAGCGCGG CGACACGTTG
TCCGGCGGTC AGCGTCAGCG CATTGCGATC GCCCGTGCCA TCGTCCGCGA TCCGTCGGTG
CTGCTGCTCG ACGAGGCGAC CTCGGCGCTC GATCAGACCA CCGAGGCGGC GATCAACAAG
ACGCTGATGA AGCTGGCGCG CGGCCGCACC ATGATCTTCT CGACCCACCG CCTGACTTCG
GTGGTCGACA TGGACGAGAT CGTCGTCGTC TCCGGCGGAC AGGCGATTGA GCGCGGCTCG
CACAAGGAGC TGCTCGCCAA GAATGGCGCG TATCGCAAGC TGTGGGACGA CCAGAAGCGC
CATGGCGCCG GCGACGATGA TGACGACGAC GATGACGACG AGTGA
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| Protein sequence | MARKPNPPVT PDSRPDDKSA ATPPADAAAG SPPPGSEGAV PPASPLDEKF ALPVGAAAPV
VPTTKPPVKQ LIADKVPAAP VPGAKAAAAD DGDDDDEDDE DDDEEDDDDD EDEELVVFTA
REAAGALATI AGFIRPVVAN YKKMLAFVVF GVVVETLFNV IMPLSLKFLI DDALGEEDFH
ELYKILSILG VAGVITSIIA VWYERWDARL SAAVISDVRT RLFEHTQRLP AGYFARTKRG
EILSRFSIDM AAFSRVVEIL ANTALLPFLE LIAGIILMLF LNWQLAVVAL LIFPITLIGP
RILTPKAVQA NYEQKVQEAG LLGLLQENVG AQAVVKAFSL QRKMFGFFSL RNQATRQKMG
QATFLTSMVE RSVTVSVLML HLLVLALGAY LATTGQITVG TFVTFESAFW EVSYNIAHLM
QFIPVSIQAA AAVRHMQELL DEKTPISDKP GAAEMPRIVD NIAFERVSFA YEGAEQPVID
NLSLKLKAGK TIAIVGPSGS GKSTLLNMVL RLYDPTEGRI SIDGVDIRNV TLESLRRSMA
VVFQENMLFN MSIRDNIRLG KEGATDAEVE QAAKKAEIHR YIMSLPQKYD TVVGERGDTL
SGGQRQRIAI ARAIVRDPSV LLLDEATSAL DQTTEAAINK TLMKLARGRT MIFSTHRLTS
VVDMDEIVVV SGGQAIERGS HKELLAKNGA YRKLWDDQKR HGAGDDDDDD DDDE
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