| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3674 |
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| Symbol | |
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| ID | 6411350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3923038 |
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| End bp | 3923859 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713554 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001992649 |
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| Protein GI | 192292044 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.222565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTATTC TCACCGACAG CTCCACTGCG TCCGACTGGG TCGAGCCCGA CGAGGTCGCG
CGCCCGGTCG TGGCCTATGG CATGGCGTCG GCGATGATCG GTTCGTTCGA GCTAGACATG
CACTGCCATG CCAAGGGGCA GATCATGCTG GTGCAGCGCG GTGCGCTGAG TTGCCGGGTG
GACGGCGGAT TGTGGATCGT GCCGCCGCGT AGCGCGGTCT GGATACCAGG CGGCGCGCTG
CACGCGATCA GGGCGACGGG CAGGCTCGAA GGTTATAGTG CGTTCGTCGC CGCCGGCATC
GACGTGGGAC TGCCGCAACG CTGCTGCGCC GTCTCGGTGA CGCCTCTGCT GCGCGAGCTG
CTGTTCCGTG CCGCCAGGCT GCCGCTGCTG TACGACGAGG ACGGGGCGAC TTCGCGTCTG
ATCGCGGTGT TGCTCGACGA GATTGCTGCT GCCAGGATTG AAGATCTGCA TTTGCCAATG
CCGTCCGATC CGCGGCTGCG CGCTTTGGCC GACCTGATGA TGGCCGCGCC CGCCGAGCGT
GGTTCGCTGG AGGGGTGGGC AGCGCGCGCC GGCCTGAGCG AGCGGACGCT CGGGCGGCTG
ATCAGCCGCG AGACCGGGAT GAGCTTCGGG CGCTGGCGCC AGCAGCTCGG CGTCATGCTC
GCGGTGCAGT GGCTGGCCGG CGGCGCCTCG ATCCAGCAGG TCGCCGCCGA CCTGGGTTAC
GAAAGCGTGC CGAGCTTCGT CACCATGTTC CGCAAGACGC TCGGCACGTC GCCGGGCCGC
TACATGGCGG AACGCTATGC CGGCAGGGCT GTGGAGACTT AG
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| Protein sequence | MPILTDSSTA SDWVEPDEVA RPVVAYGMAS AMIGSFELDM HCHAKGQIML VQRGALSCRV
DGGLWIVPPR SAVWIPGGAL HAIRATGRLE GYSAFVAAGI DVGLPQRCCA VSVTPLLREL
LFRAARLPLL YDEDGATSRL IAVLLDEIAA ARIEDLHLPM PSDPRLRALA DLMMAAPAER
GSLEGWAARA GLSERTLGRL ISRETGMSFG RWRQQLGVML AVQWLAGGAS IQQVAADLGY
ESVPSFVTMF RKTLGTSPGR YMAERYAGRA VET
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