| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3560 |
|---|
| Symbol | |
|---|
| ID | 6411234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3811795 |
|---|
| End bp | 3812523 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642713438 |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_001992535 |
|---|
| Protein GI | 192291930 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.665124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACGT TGATTGCCGG CGCCATCGCC GTTTTCGTGC TCTACACGCT GCTGCAGATG
TTCCGGTCCG CCAACCCGGC GGTGCTGGCG CGGGCGTTGA AGATTTCCGG CGGGATCGTC
ATGCTGGCGG CGGCGCTGTT TACCGGTGTC AAAGGCGAAC TGGCGGTCGC AATCCCGCTC
GGCCTGTTCG GTGCCGGGCT GCTGGGCTGG ACGCCGCTGC AGAACGCCGG CTTCGGCAAT
CTCGGCGGGC TGTTCGGAGG CCTGGGCGGG CGCTCGCGGG GGCAGGCCTC GACGGTGCGC
TCCACCTATC TGGAAATGGT GCTGGACCAC GACAGCGGTG CGATGACCGG ACGGATCCTG
GCCGGCCCCA ATGCCGGACG CTCGCTCGAC GAATTCGACC TCGGCCAGCT TGCTGCAATG
CTGGCCGGCT TCGATGCCGA GAGCTGTGCG CTACTTGAAA GCTATCTGGA CCGCCGGTTT
CCCGCTTGGC GTCAGAACGC GCATGGAGAT GCGGCAGGGG GGCAGCGTAG CCAGGCGTCG
GGCAGTAAAA TGACGACCGA GGAAGCCTAT GAGATCCTTG GCCTGCAGCC GGGAGCGGGG
CCGGACGAGA TCGGACGCGC CCACCGCACT CTCATGAAGA AATTGCATCC CGACCAAGGG
GGGTCGACGT ACCTTGCCGC CCGGGTAAAC GCGGCCAAGG ATACCTTGCT TCGAACGCAT
CGCAGCTAA
|
|---|
| Protein sequence | MPTLIAGAIA VFVLYTLLQM FRSANPAVLA RALKISGGIV MLAAALFTGV KGELAVAIPL
GLFGAGLLGW TPLQNAGFGN LGGLFGGLGG RSRGQASTVR STYLEMVLDH DSGAMTGRIL
AGPNAGRSLD EFDLGQLAAM LAGFDAESCA LLESYLDRRF PAWRQNAHGD AAGGQRSQAS
GSKMTTEEAY EILGLQPGAG PDEIGRAHRT LMKKLHPDQG GSTYLAARVN AAKDTLLRTH
RS
|
|---|
| |