| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3555 |
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| Symbol | |
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| ID | 6411229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3802754 |
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| End bp | 3804532 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642713433 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992530 |
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| Protein GI | 192291925 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0913023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCA ACCGTCCGCA ACGGCTGCTG CTGTGGGTGC TCGGTCTGTA CGGGACGCTG
TGGTTCATCA GCGCCATCAG CTTTCCCGGG CTGCCCGCCG TTGGTTACGA AATGGCGCTG
TTCGGCAGTG AGCTGCAGGG CGGCTACTGG AAGTACCCGC CGCTGGCGCC GTGGCTGACC
GAACTGGCTT CGCTCGCCAC CGGACGATGG AACGGCGCCC AGCTTCTGCT CGCGCTTGGC
TCCGCGCTGA TGACGTTGGC GCTGCTGTGG CGCCTCGGCG CCTCGATCTT CGGCTCCAGC
GGGGCGACGC TCGCCGTGGC GCTCACCATC CTGATCGGCT GCTTCGGCCC GCAGGTCACC
GCATACGATC CGGCGATCGC CAGCCTGCCC TTTGCCGTCG CATTGGTACT GCTGTATCGC
CGCGCCGTGC TCGGTGGCGC GCGGTCGAGC TGGATCGGGC TCGGCATTGC CGCTGCGCTG
CTGATCTCAA CCAACCACGC CGGCACGGCA CTCGTCCTCG TGCTGATCGG ACACTTGGTG
CTGACCGCGG ATGGTCGCCG CCGCCTGGCA ACGAGCGGCG TGGCGGTCGC GGCGGGGGCC
TGTTTCGTGG TGCTGCTGCC GCACCTGATG TGGCTGGCGC AGGCCCACGT CGCCTCTCCT
GTCCCAGACG ACGGAGCGAC AGGTCTGTGG CCAAGGATCA GTGCGGCGTT CGCCTTCGTG
TTCGGCCAGG TCGGGCTAAA TCTCGGATTG ATCGTCATCG CCGCTCTCGC CTTCATCCCG
CGGCTGCCGC TGCAGGGCGA GCCGGCGGAT CTCGAACTCA CTGCCCCCAG CGCGTTCGAT
CGCTCGCTCC TGGTTTCAGC CGCTGTGCTG CCGTCGATCC TGGTCGCGCT CGGCAACGTG
TTCGGCTGGT TCACAATCGG GGCCTACACC GGCAGCGCGC TGGTGGCGTT CTCCGGTCTG
GCTCTGGTGG CATTGCTGCC TGCCCGGCTG ACGATCCGGG CCCCCCGGCT CGCGATCGCC
GCGTGGATGC TGGTGCTGTT CGGTGTACCG ATCGGCTACG CGACCTCGAC CTACTCGCGC
GCCTATGGCA GCGGGCCGGT GCCGACCGAG CTGTATCCGG CCAAGGCGCT GTCGAAAGCG
ATGCAGTCAG TCTGGAAGAG CAGGACCACA CGCCCGCTCG ATATCGTCAC CGGCAGCACG
CGCGAGGCCG GCTTCGTCGC AGCCTATGCC TCGCCGCGGC CCTCGGTGTT CATCGACGCC
GATTTGACCA AGAGCCCGTG GATCACGGCC GAGCGGTTGA AGCGCTCCGG CACGCTGGTG
GTGTGGAGTA CCGACGAATT CAAACGCACC GACGAGCTAC CGCCGCCATA TCGGACGGCA
CTGGGCAATG CGCCTTCGGT GTTCGGCACC ATGGTGCTGC CGCTCGGCGG CGGGAAGCTG
AAGGCGTATG GCTGGGCGAT GATCGCGCCC GACGGCGTGG TGCTGCCGCC TCCCGCCTCA
GCGGCACCGC CGGCGCCAAG CGTGGCACAA CCGCCGACAC CGCCCTCGCC AGCTCCAGCG
CCAGTCCCGC CTGGCCCGCC TGTTGCCACT GCTCCGGAGG CACCGCAGCC TGCTCCGCCT
GAGGCAGCAG AGCCTGCAGC ACCGGCCGCG ACCTCGCCTG CGCAGCCAGC TGCTCTGCCT
CCTGTGGCCG AGCCAGAAAA GCCGGAAGCG CCCGTCCCGG CGCCACCGGA CGAGCAACCG
TCGCCGGCCG GACCGTCACC GACACGGTCA CCGGAATAG
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| Protein sequence | MLRNRPQRLL LWVLGLYGTL WFISAISFPG LPAVGYEMAL FGSELQGGYW KYPPLAPWLT
ELASLATGRW NGAQLLLALG SALMTLALLW RLGASIFGSS GATLAVALTI LIGCFGPQVT
AYDPAIASLP FAVALVLLYR RAVLGGARSS WIGLGIAAAL LISTNHAGTA LVLVLIGHLV
LTADGRRRLA TSGVAVAAGA CFVVLLPHLM WLAQAHVASP VPDDGATGLW PRISAAFAFV
FGQVGLNLGL IVIAALAFIP RLPLQGEPAD LELTAPSAFD RSLLVSAAVL PSILVALGNV
FGWFTIGAYT GSALVAFSGL ALVALLPARL TIRAPRLAIA AWMLVLFGVP IGYATSTYSR
AYGSGPVPTE LYPAKALSKA MQSVWKSRTT RPLDIVTGST REAGFVAAYA SPRPSVFIDA
DLTKSPWITA ERLKRSGTLV VWSTDEFKRT DELPPPYRTA LGNAPSVFGT MVLPLGGGKL
KAYGWAMIAP DGVVLPPPAS AAPPAPSVAQ PPTPPSPAPA PVPPGPPVAT APEAPQPAPP
EAAEPAAPAA TSPAQPAALP PVAEPEKPEA PVPAPPDEQP SPAGPSPTRS PE
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