Gene Rpal_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3538 
Symbol 
ID6411212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3788382 
End bp3789137 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content67% 
IMG OID642713416 
ProductNUDIX hydrolase 
Protein accessionYP_001992513 
Protein GI192291908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CCGCGACACA GACCGAGCCG AAGGTCGAGC AGGATCACCA GGAACCCAGC 
CACCACCCCT ATTTCCGTCC GAAAGACGCA GCGACTCTGA TCCTCGTCGA TCGCAGCGGC 
GCGACGCCGA AGGTGCTGGT CGGCAAGCGC CACGACAACG TCGTGTTCAT GCCCGGCAAG 
TTCGTGTTTC CCGGCGGCCG CGTCGACAAG AGCGACGTCC GCGTCCCGGT CGCGGCGCCG 
ATCCCGCCGG AGCTGGAAGC CAATCTGCTG AAAGGCAGCC CGAAGACCAC CCTGTCCCGC 
GCCCGCGCGC TGGCGATCGC TGCGATCCGC GAGGCCTGCG AAGAAACCGG GCTGTGCCTC 
GGCTGCAAGA CCGACGCCAA GGCGAAGCTG GACGGTCCGT GGCAGCCGTT CGTTGAAGCC 
GGCCTGCTGC CCGATCCGTC CGGCCTGTTC CTGATCGCGC GCGCGATCAC CCCGCCCGGC 
CGCATCAAGC GGTTCGACAC GCGCTTCTTC ACCGCCGATG CCTCGGCGAT CGCGCACCGC 
GTCGAGGGCG TGGTGCACGC CGATGCCGAA CTGGTCGAAC TGGTATGGGT CGAGCTCGGC 
TCCAAGCCGC TCGCCGATCT GCATCCGATG ACGAAGAATG TGCTCGGCGA ACTCGATCGC 
CGGCTCGCCA CCGGGCCGCT GCGCCACGAC GCACCGGTGC CGTTCTTCCA TTTCTATGGC 
GGCAAGATGC AGAAGGACAT GCTGCCGGGC GGCTGA
 
Protein sequence
MTESATQTEP KVEQDHQEPS HHPYFRPKDA ATLILVDRSG ATPKVLVGKR HDNVVFMPGK 
FVFPGGRVDK SDVRVPVAAP IPPELEANLL KGSPKTTLSR ARALAIAAIR EACEETGLCL 
GCKTDAKAKL DGPWQPFVEA GLLPDPSGLF LIARAITPPG RIKRFDTRFF TADASAIAHR 
VEGVVHADAE LVELVWVELG SKPLADLHPM TKNVLGELDR RLATGPLRHD APVPFFHFYG 
GKMQKDMLPG G