| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3515 |
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| Symbol | |
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| ID | 6411189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3762889 |
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| End bp | 3764274 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713394 |
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| Product | Patatin |
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| Protein accession | YP_001992491 |
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| Protein GI | 192291886 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.393229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCGT GGAGAGATCG TCTTCTGTCC GCAGCCGCCG CCTGCCTCGT GCTCGCCGGT
TGCGCCTCGG TTTACAACAC GCCGGTCAAC GTGCCGCTCG AAGGAGTGGT TGCCGACAGG
GTTGCGTCCG ACATCGGCAC GCGCAGCGAA GACGCCATCA TTGGCCTGTC GTTCTCGGGC
GGCGGCACCC GCGCGGCTGC ATTCTCGTTC GGCGTGTTGT CGGAGATGGA GCGCGTGCCG
CTGCATGGCG CGCGTTCAGC GATGCTCGAT CGTGTCGGCT TCGTCTCTGG AGTCTCCGGC
GGGTCGGTCA CTGCCGCCTA TTTCGGCCTG AAGGGACGCG CTGCGCTCAG CGACTTCCGC
GAGCGCTTCC TGCTGCGCAA TGCGGAAGAG GGGCTCCAGA CCACGCTGTC GCTCAACACC
ATCGGCAAGG CGTTCACCGG CGGCATCAAC GACTCGGTCG GCTTCACCCG TTGGCTCGAC
GCGCATTTGT TCGAGGGCGC GACCTTCGCG CAACTGCGCG CCGGCGACCG GCCGACGGTG
TGGATCAACG CCTCCGACAT CTACAATCGC GTGCCGTTCG TGTTCACCAG CACGTCGTTC
TCCGCCATCT GCAGCGACCT CGACGCCTAT CCGCTGTCGA ACGCGGTCGC GGCCTCGGCG
GCGGTGCCGC TCGCGTTTGC TCCGGCGGTT GTCCAGGCGT TTCCCGGTGC CTGTAACACA
CCGCTGCCGC GCTGGGTCCG GCGCGCCGCG ACGGCCGAGG GCAACTCCTC GCCGATGCTG
AGCTCCTACG CCAAGGCGGT GCTGCGTTAT CGCGAGGGCG CGGTACCCTT CATCAAGCTG
CTCGACGGCG GGCTGGTCGA CAATTACGGC GTCTCGGCGC TCACGATCGC GCGCGAGTCC
TCGGAGACGC CGTACGGTCC ACTGACCCCG CAGCAGGCGG TCAAGCTGCG GCGGCTGATG
ATGCTGGTGG TCGACGCCAA GACCGGCATC TCGGGCAACT GGGTCGACAC CGTCGAAGGT
CCGAGCGGCG TCGAGCTGCT CAAGGCCGCC GTCGACACCA CGATAGATGC CAGCGTCGGC
GCCAGCTACA CGGCGTTCGA CCGCACGATC TCGGATTGGC GCGAGAAGCT GGTGCGCTGG
CGCTGCGGCC TGTCGGCAGC GGATCGGGCG CGCTACGGTG CCGGACCCGG CTGGGACTGC
CGCGACCTGC GCTTCTTCGT CGGCCGGCTG GCGTTCGATC AGCTCGAGGC GCAGCGGGCT
GCGTCTTTGG AGCGGATCGC CACGCGCTTC GTGCTGCCGC CGCAGCAGGT CGACGAACTG
ATCTCGGCGG GGCGCGACGT GCTGCGACAG AATCCGGTCT TCCGCGCCTT CGCAGCCAGC
CTGTAG
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| Protein sequence | MKPWRDRLLS AAAACLVLAG CASVYNTPVN VPLEGVVADR VASDIGTRSE DAIIGLSFSG
GGTRAAAFSF GVLSEMERVP LHGARSAMLD RVGFVSGVSG GSVTAAYFGL KGRAALSDFR
ERFLLRNAEE GLQTTLSLNT IGKAFTGGIN DSVGFTRWLD AHLFEGATFA QLRAGDRPTV
WINASDIYNR VPFVFTSTSF SAICSDLDAY PLSNAVAASA AVPLAFAPAV VQAFPGACNT
PLPRWVRRAA TAEGNSSPML SSYAKAVLRY REGAVPFIKL LDGGLVDNYG VSALTIARES
SETPYGPLTP QQAVKLRRLM MLVVDAKTGI SGNWVDTVEG PSGVELLKAA VDTTIDASVG
ASYTAFDRTI SDWREKLVRW RCGLSAADRA RYGAGPGWDC RDLRFFVGRL AFDQLEAQRA
ASLERIATRF VLPPQQVDEL ISAGRDVLRQ NPVFRAFAAS L
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