Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3472 |
Symbol | |
ID | 6411146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 3717237 |
End bp | 3718325 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642713351 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001992448 |
Protein GI | 192291843 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTCG TCAATACGCT CGGACGCTAC TTCGCCCGCC GCTTCGTGAT CGCCTCGCTC GGGGTGTTCT TCGGGCTGTT CGTGCTGCTG GTGTTCGTCG ACTATGTCGA CCTGCTGCGC CGGGCTGGCG GCCTCGCCGT CTCGGCATTC TATGTCGCGC AGGCCTCGTT CTGCCGCGTG CCGCAATTGC TGGAGCGGCT GCTGCCGTTC TGCATCCTGA TCGGCGGCAT GACCTGCTAC CTGGCCCTGT CGCGCAGCCT TGAACTGGTG GTGGCGCGCG CCGCAGGCCT GTCGGCCTGG GAATTCATCT CACCCGCCCT CTGGAGCGCG ATCGCGATCG GCATCTTTGC CACGACCGTG TTCAATCCGC TGTCCGCGCA CATGCAGGAG CGCGCCAAGC AGATGGAAGC CGAAATGTTC GGCGAGAACA CCGGCGGGTT GCAGGATGCC AACGGCTTTT GGATGAACCA GGTCAGCCCT GACGGACAGG CGATCATCAA CGCCGCACGC AGCCAGCAGC AAGGTGCGGT GCTGACCGGC ATCACGGTGT TTCGATTCGA ACCCGACTTC CAGTTCAAGG ACCGAATCGA GGCGCGCGAA GCGGTGCTCG AACCGGGCCA TTGGCTGCTG AAGAACGTAC GCCGTTATAC AATGGACGGT GCCCCGGTAG ATCAAGACAC CCTTGAGTTG CCGACGTCAC TGACACTCGC GCAGGTCCGC AACAGCTTCG CCACCCCGGA AAGTGTGTCT TTTTGGCAAC TTCCGACCTA CATCAAGTCG TCGGAAAACT CCGGTTTTGC GACCGCGGGC TATCGCCTGC AGTATCACAA GCTGCTGGCA AAGCCGTTTT TGCTGGCCGC GATGGTCATG CTAGCTGCTT CTGTGAGCTT GCGATTCTTC CGTTTCGGCG GCGTGCAAAA GATGGTTTTG AGTGGCGTGG CCGCAGGCTT TCTGCTCTAT ATCCTGTCGA AAGTGACCGA GGATTTGAGT AAGGCTGAAC TGATGCATCC GCTTGCTGCA GCGTGGTTGC CCGTATGCGT GGGCGGTCTC GCTGGATTTC TAGCCTTGCT CTATCAGGAG GACGGATAG
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Protein sequence | MMVVNTLGRY FARRFVIASL GVFFGLFVLL VFVDYVDLLR RAGGLAVSAF YVAQASFCRV PQLLERLLPF CILIGGMTCY LALSRSLELV VARAAGLSAW EFISPALWSA IAIGIFATTV FNPLSAHMQE RAKQMEAEMF GENTGGLQDA NGFWMNQVSP DGQAIINAAR SQQQGAVLTG ITVFRFEPDF QFKDRIEARE AVLEPGHWLL KNVRRYTMDG APVDQDTLEL PTSLTLAQVR NSFATPESVS FWQLPTYIKS SENSGFATAG YRLQYHKLLA KPFLLAAMVM LAASVSLRFF RFGGVQKMVL SGVAAGFLLY ILSKVTEDLS KAELMHPLAA AWLPVCVGGL AGFLALLYQE DG
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