Gene Rpal_3426 details

Gene Information

• Locus tag: Rpal_3426
• ID: 6411100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3668345
• End bp: 3668809
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642713306
• Product: response regulator receiver protein
• Protein accession: YP_001992403
• Protein GI: 192291798
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0768314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCGCG AGCGCACACT GCCGACCGTG CTGGTGGCCG AAGATCACGA CTACGACAAG 
CTGATCCTGA CGGAGGTGTT CGCGCGCGCC TCAATTTCCG CCGACCTCCG GTTCGTCAGC 
GACGGCGAAC AGACGCTTGA CTACATCTAT GGCCGCAACC GGTTCGCGGA CCGCGGGGAC 
GCGCCCTACC CGGCGATCGT GCTGCTCGAT CTCAACATGC CCCGGCTGGA CGGCCGCAAG 
GTCGTGCGTC TGCTGCGCCA GGACGAGACG GTGCGGCATC TGGTGGTGAT CGCGCTGTCG 
ACCTCGGAAA GCGCCAAGCA CATCACCGAA GCCTATTCGA TCGGCTTCAA CGCCTATCTG 
GTAAAGCCTG CGAACATCGC CGATTACGTC GAAGCGATCC GTTCGCTGTG GCACTTCTGG 
ATGAACACGG CCTCGCTTCC GACCACCGAG GCTTATCGAA CGTGA 

 

Protein sequence

MNRERTLPTV LVAEDHDYDK LILTEVFARA SISADLRFVS DGEQTLDYIY GRNRFADRGD 
APYPAIVLLD LNMPRLDGRK VVRLLRQDET VRHLVVIALS TSESAKHITE AYSIGFNAYL 
VKPANIADYV EAIRSLWHFW MNTASLPTTE AYRT