| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3409 |
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| Symbol | |
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| ID | 6411083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3647806 |
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| End bp | 3648489 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713289 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001992386 |
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| Protein GI | 192291781 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATTA AAGTTCTGAT CATCGACGAC GAACCGCCGA TCAGGAAGCT GCTGCGGATG
GGCCTTGGCA GTCAGGGCTA CGAGGTGATC GAGGCCAGCA ACGGCAAGCT CGCGCTGCAG
GCGATGGCGA ATACGCCGCC GGATCTGGTG GTGCTCGATC TTGGACTGCC AGATCTGCCC
GGCCACGAGC TGCTTCGGCA GATCCGCGCG CGCAGCGAAT CCGTTCCGAT CGTCGTGCTG
TCGAGCCGCG GTGACGAAGC GGGCAAGGTC GAAGCGCTCG ATCTCGGCGC CGACGACTAC
GTCACCAAGC CGTTCGGCAT GGACGAGCTG CTTGCGCGGC TGCGCGCCGC GCTCCGGCAC
CAGCTTCAGG TGCAGGGCGA ACGTCCGGTG TTTCGCGTCG GAGACTTGTC CGTCGATCTG
GTGCGGCGGA TCGTCAAGCT CGCCGACAAG GATGTGAAGC TGTCGCCGAA GGAATATGAT
CTGCTGCGCG TGCTGGTGCA GCACGCCGGA AAGGTGTTGA CGCACAAGTT TCTCCTGCAC
GAATTGTGGG ACGAACTCAC CGACGCGCAG TATCTGCGGG TCTATGTTCG CCAGCTTCGG
CAGAAAATCG AGCCAGATCC CGAGCGTCCG CAGTACCTGC TGACGGAAAC TGGGATCGGC
TATCGCCTGA AGGCACCGAA CTAG
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| Protein sequence | MPIKVLIIDD EPPIRKLLRM GLGSQGYEVI EASNGKLALQ AMANTPPDLV VLDLGLPDLP
GHELLRQIRA RSESVPIVVL SSRGDEAGKV EALDLGADDY VTKPFGMDEL LARLRAALRH
QLQVQGERPV FRVGDLSVDL VRRIVKLADK DVKLSPKEYD LLRVLVQHAG KVLTHKFLLH
ELWDELTDAQ YLRVYVRQLR QKIEPDPERP QYLLTETGIG YRLKAPN
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