| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3407 |
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| Symbol | |
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| ID | 6411081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3646381 |
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| End bp | 3647304 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713287 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001992384 |
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| Protein GI | 192291779 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGC TCTGCTCCGC GACCGATTGG CTGACCGGTT ACATCCCCGA TCTGCCAACG
CCGTTCAACG AAGCCGGCGA CATCGACCTG GTCTCACTGG CTCGCTTGAT CGCGCGGGCG
ATCAGTTCGG GCGCATCTGC GGTTGTGATC TGCGGAACCG CCGGCGAGGC ATCAACACTC
ACACCAGCCG AGCAGACAGC CGTTATCAGC GAGGCCGTCG GGATCGCAGG CAGACGGATC
AGGGTCATCG CCGGCGCCGG CTCGAACGCG ACGGGCCAGG CAATCGAACT GGCCGCGCGG
GCGCAATCCG CCGGTGCGGA CGCCGTTCTT TCGGTCGTTC CCTACTACAA CAAGCCGACG
CAGGACGGCA TTCACGCACA CTTCGACGCC ATCGGTCGCG CGATCGAACT GCCGGTCCTG
CTTCACGATG TCCCCTCTCG CACCGCTCGT CCTCTGGCAG ACGATACGAT CGTCCGCCTT
GCACGATCCG GTCGGTTCAC GGGCCTGGTC GACGGCTCGG GCGACGTGCC GCGGCCCCTT
CGGCTTCGGC CCCGGTTACC AGCCGGTTTT CAAATGCTGT CGGGCGACGA CACAACGTCC
TTTGGATTTC TTGCGAGCGG CGGCGATGGG GCAATCTCAG AGGTGGCCAA CATTGCCTCC
GACCTTTGCC GCACGATTCA CACCTATTGC CGCCAAGGCC GCCTGCAATC GGCGCGCTAT
CTCCAGAAGC GTCTGCTACC GCTGGCATCC AGCCTCGATC AGGACTCGCC TGCGTCTCTC
AAATACGCGC TGAATTTGCT CGGCCTGATC CGGCCCGATA CACGCCTGCC GATCGTCCCG
CTGGCTGGCG ATTCCGCCGC GCATCTTGCC GCCGTGTTGG CAGCGATGGC CGACGAGGAT
CTCGCCGAGC CGCTGGGCGC GTGA
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| Protein sequence | MAKLCSATDW LTGYIPDLPT PFNEAGDIDL VSLARLIARA ISSGASAVVI CGTAGEASTL
TPAEQTAVIS EAVGIAGRRI RVIAGAGSNA TGQAIELAAR AQSAGADAVL SVVPYYNKPT
QDGIHAHFDA IGRAIELPVL LHDVPSRTAR PLADDTIVRL ARSGRFTGLV DGSGDVPRPL
RLRPRLPAGF QMLSGDDTTS FGFLASGGDG AISEVANIAS DLCRTIHTYC RQGRLQSARY
LQKRLLPLAS SLDQDSPASL KYALNLLGLI RPDTRLPIVP LAGDSAAHLA AVLAAMADED
LAEPLGA
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