| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3405 |
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| Symbol | |
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| ID | 6411079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3643505 |
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| End bp | 3645931 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713285 |
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| Product | hypothetical protein |
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| Protein accession | YP_001992382 |
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| Protein GI | 192291777 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGA CCAAGCCCCC CGTCCCGCAG CTCAACCTCA CCGCCGTGCA CGAGGCGGCC
GAACGCGCCG CCCGCGCTAT CCCGCCGCTG TGGCCGCTGG AATCGAGCGT CGCGGTCAAC
CCGTTCCTCG GTCAGATCGG CGAGCCGCTC GCGGTCGCGG CCGCACGGCT GCGCCGCGTC
GCCGGCGCCG CCGTGACGAT GCCACGCGCT TGGTACGCCG AGCGGATCGC CTCCGGCGAG
CTCAGCGACG TCGACCTCGC CGCTGCAATC GACGCCGCAA CTCCGACCAC ACGTCCGCTG
ACGATTGCCG AGCTGAAGCG GGCTGCGCAG ATGGAAATCG CGCCGCCGCA GGCGTTGCCG
ACCGTCGCCG ACCTTGCGAG CGCCGTCTCG GGCTTCGATT GGACCGGCTT CGTCGCCGAG
CGCATCAGCG CCTGGGCGAG CGGTTACTTC GATCGCGGCC AGGCATTGTG GGCCGCGCCG
AAGGGACCGA ACGCATATGC GGCCTGGCGG CTGACCGCGA CCCACGATCT GACACCGGAG
ATCTTCAGCA TCACCGGCTT CGCGGCGGAC GTCGCTGCCG CTCCGGAATC GGCGGATGCG
GCGCTGATCC GCGCCGTGGA GCAGCTTGGC CTGAGCGAAG CTGCATCGGA GAGCTACTTT
CATCGCCTGC TGGTCGGCCT CGGCGGCTGG GCCCAGCTCG CGCGCTATCG GCTGTGGCAG
GCGGAGCTTT CCGGAAGCAC CGACACCACA GTGACTGACC TCCTCGCCGT CCGTGCAGTG
TGGGATTCTG CCCTGCTGCG CAAGTACCAG CCCCAGATCG CTGCGGAATG GACCGATGCG
ATCAATGGCT ACGCGCAGCC GCTGCAGCCG ACCGAAGACG ATCAAATCAA CGCCATCCTG
CAGGATGCGG TCGAACGCGC CGCGCAGCGG AAGCTACAAA CCGTGTTGAC GGCTTCATCG
CAGCCGAAGC CGGAAGATCG CCCGGCGCTA CAAATGGCGT TCTGCATCGA CGTTCGCTCC
GAGCCGTTCC GGCGCGCACT GGAAAGTCTC GATCCACGCA TCCGCACGCT CGGATTCGGC
GGCTTCTTTG GCCTTCCGAT TGCGCATCGG CGGTTTGCGT CCGACGTCGT TGAAGCCCGC
CTGCCGGTGC TGTTGCCGCC GCGTGTTACC ACCAGCTGCA GCGGACATAC GCACGCGCAC
GAGGCGAACG ACCGCGCGAA GCGTGTCGCC GCGCGCGCCA AGCGCGCTTG GGGCCGCTTC
AAGCTGGCAG CGATCTCGTC CTTTGCCTTT GTCGAGTCGA TGGGGCCGGT CTATGTCGCC
AAGCTTCTCA GCGACGGCCT GAGGCCCGGT ACGCGCACGA CCAACACTGA TCCGGTGCCG
CAGTTTGATC CGCCTCTCGC TCTCGGCGCT CGGGTCGATA CGGCCGAGGC CGTGCTGAGA
GCCATGTCGC TGACGGGTCC ATTCGCGCCG CTGGTTCTGA TCGCCGGGCA TGGCGCCAGC
GTGGTCAACA ATCCGCACGC CAGTGCGCTG CATTGTGGCG CCTGCGGCGG CTTCCCCGGG
GACGTCAATG CGCGGCTGCT CGCCGGACTG CTCAACGATC CGGAGGTCCG TACGGCACTG
GCCGGTCGCG ACATCGCGAT CCCAGCCGAT ACGCTATTCG TCGGCGCACT GCATGACACC
ACCACGGACG CAGTGACGCT ATACGATGCC GACCATCACT CGCCGGCCCA CGCCGCGGCC
CTCGCGCAGA CGCGGGACTG GCTCGCCACC GCCGGGGCGC TGACGCGGAG CGAGCGGGCG
TTGCGGCTGC CACGGGCGGC GACGGGCGGC GCGATTGCGC GGCGGGCGCG CGATTGGGCC
GAGGTCCGCC CCGAATGGGC GCTCGCCGGC TGCCGGGCCT TCATCGCCGC GCCGCGGTCC
CACACCAGCG GTCGTGACCT TCAGGGACAG GCGTTCTTGC ACGACTATGA CTGGCGCAAG
GATACCGATT TCTCGGTGCT TGAGCTGATC CTCACCGCGC CAGTGGTGGT CGCGAGCTGG
ATCAGCCTGC AGTACTACGG CTCCACCGTC GCGCCGGAAA CGTTCGGCGC CGGCAACAAG
CTGCTGCACA ACGTCACCGG CGGGATCGGC GTGGTCGAAG GCAATGGCGG CCTGCTGCGC
TCCGGCTTGC CGTGGCAGTC GGTGCACGAT GGCGAACGCT TGGTCCACCA GCCGCTTCGG
CTGTCGGTGT TGATCGAGGC TCCGCATGAG GCGATCAGCA CCATCCTCGA TCGCTACCCG
GAAGTGCGTG CGCTGTTCGA CAACGGCTGG ATGCATCTGC TCGCGCTCGA CGATAACGGT
CGGATGCACT GGCGCTACGG CGGCGATGGT GGTTGGGAGC GGGCCGACAA TCCTCCCGCC
AACCAACGCG TCGCGTCTTT TGAGTAA
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| Protein sequence | MLMTKPPVPQ LNLTAVHEAA ERAARAIPPL WPLESSVAVN PFLGQIGEPL AVAAARLRRV
AGAAVTMPRA WYAERIASGE LSDVDLAAAI DAATPTTRPL TIAELKRAAQ MEIAPPQALP
TVADLASAVS GFDWTGFVAE RISAWASGYF DRGQALWAAP KGPNAYAAWR LTATHDLTPE
IFSITGFAAD VAAAPESADA ALIRAVEQLG LSEAASESYF HRLLVGLGGW AQLARYRLWQ
AELSGSTDTT VTDLLAVRAV WDSALLRKYQ PQIAAEWTDA INGYAQPLQP TEDDQINAIL
QDAVERAAQR KLQTVLTASS QPKPEDRPAL QMAFCIDVRS EPFRRALESL DPRIRTLGFG
GFFGLPIAHR RFASDVVEAR LPVLLPPRVT TSCSGHTHAH EANDRAKRVA ARAKRAWGRF
KLAAISSFAF VESMGPVYVA KLLSDGLRPG TRTTNTDPVP QFDPPLALGA RVDTAEAVLR
AMSLTGPFAP LVLIAGHGAS VVNNPHASAL HCGACGGFPG DVNARLLAGL LNDPEVRTAL
AGRDIAIPAD TLFVGALHDT TTDAVTLYDA DHHSPAHAAA LAQTRDWLAT AGALTRSERA
LRLPRAATGG AIARRARDWA EVRPEWALAG CRAFIAAPRS HTSGRDLQGQ AFLHDYDWRK
DTDFSVLELI LTAPVVVASW ISLQYYGSTV APETFGAGNK LLHNVTGGIG VVEGNGGLLR
SGLPWQSVHD GERLVHQPLR LSVLIEAPHE AISTILDRYP EVRALFDNGW MHLLALDDNG
RMHWRYGGDG GWERADNPPA NQRVASFE
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