| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3404 |
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| Symbol | |
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| ID | 6411078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3641912 |
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| End bp | 3643483 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713284 |
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| Product | NADH/Ubiquinone/plastoquinone (complex I) |
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| Protein accession | YP_001992381 |
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| Protein GI | 192291776 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCCCTG ATCTGCTGCC GCTCGCCGCA CCGTTGCCCC TGCTGATCGC CGCCGCGTTC
GCCTTCGCGC GGCCCGGGCG CCGCCCGCCG CTGGTGCCGG CGATGGCCGA AGCCGCGGCA
TTGCTGGCCT TCCTCATCAC CGCCGGTGCG CTCGCGGTGC CGATCATGGT CGGCGCCGCG
ACGAGCCCGC TGATCGGACT TGCCGGCGTC GGCCTGTCAG CGCGGCTCGA TGCTGTCAGC
GCCACCATGC TGCTCCTGGT CGGGTTCGTC GGATGGATCG TGGTGCGCTA CGCGCGGACT
TATCTCGACG GCGAGGCGCA CCAGGGCGCA TTTCTTGGCT GGCTGTGCAC GGCAATCGCC
GCGGTGCTGC TGCTGGTGCA GTCCGGCAAT CTGGTGCAGC TCGCCGCGTG CTGGATCGCC
ACCAGCGAGT GTCTGCACCG GATGCTGCTG TTCTATCCGA ACCGCGCCAC GGCGCAGCGG
GCCGCACGCA AGAAGCGGCT ATTCGCCAGC ATCGGCGCGG CCGCGATGCT CGGCGGCGTG
GCGCTGCTGG CAACCGCGTA TCACTCCACG GATATTGCCA CCATCAACGC CGCCGCACGT
GCCGGCGATG CACCCGCCGC TGCGATGATC GCGGCCGGCT TACTGGCTGT CGCAGCGCTG
CTGAAGTCGG CGCAATTCCC GACCCACGGC TGGCTCACCG AAGTGATGGA AGCGCCAACG
CCGGTGTCGG CACTGCTGCA TGCCGGCGTG ATCAATGCCG GCGGCTTCCT GCTGATCCGC
TTCGCCGATC TGATGATGAC GGTGCCCGGC GTGCTCGCGG TGCTGGCGAT GGTCGGCGGC
TTCACCGCGC TGTTCGGCGC ACTGGTGATG CTGACCCAGC CGGCGGTGAA GACCTCGCTG
GCGTGGTCCA CCGTGGCGCA GATGGGCTTC ATGATGCTGG AATGCGGTCT GGCGCTGTTT
CCGCTGGCGC TGCTGCACAT CGTCGCCCAC TCGCTTTACA AGGCGCACGC CTTCCTCGCC
TCCGGCGGCG CGGTTGAACA GATCGTGGCG ATCCGGCGGC CCGGCTCGAT CGCGGTGCCG
AGCGGCACGG CCGTGGCGCG GGCCTTCCTG GCGGCACTGG CGATCTACGT GGCGATCGGC
GCCGGCTTCG GCTTGGTGCT CGGGTTCGAT CACAAGCCGC CGCAGTCGCT AGCGCTCGGC
GCCATCCTGG TGTTCGGCGT CGCGTATCTG CTCGCGCAGG GGCTGGCCGA CGCCGCGCCG
CGGCTCTTGA CCCGCCGCAC CGCGATCTAC TCCGCCGCGA CCGCCGCCGG TTACTTCGCG
CTGCAGACAA CCGCCGAATG GCTGACCGCC GGCACACTGC CGCCGCCGCT CGCGCCCGGA
CGGCTGGAAT GGACGCTGAT ATCGCTGGCG GTGCTCAGTT TCGGCGGCAT CGCCATCGCC
CAGGCGCTGT TTCCGCTGTG GACCTCGCAC CCGGCGACTG CAGGCCTGCG CATCCACCTG
TCGAATGGCC TCTACATCAA CGCCGCCCTC GATCGCCTGC TGAGCGGCTG GTCCGCCCGC
GCCACCTCGT GA
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| Protein sequence | MLPDLLPLAA PLPLLIAAAF AFARPGRRPP LVPAMAEAAA LLAFLITAGA LAVPIMVGAA
TSPLIGLAGV GLSARLDAVS ATMLLLVGFV GWIVVRYART YLDGEAHQGA FLGWLCTAIA
AVLLLVQSGN LVQLAACWIA TSECLHRMLL FYPNRATAQR AARKKRLFAS IGAAAMLGGV
ALLATAYHST DIATINAAAR AGDAPAAAMI AAGLLAVAAL LKSAQFPTHG WLTEVMEAPT
PVSALLHAGV INAGGFLLIR FADLMMTVPG VLAVLAMVGG FTALFGALVM LTQPAVKTSL
AWSTVAQMGF MMLECGLALF PLALLHIVAH SLYKAHAFLA SGGAVEQIVA IRRPGSIAVP
SGTAVARAFL AALAIYVAIG AGFGLVLGFD HKPPQSLALG AILVFGVAYL LAQGLADAAP
RLLTRRTAIY SAATAAGYFA LQTTAEWLTA GTLPPPLAPG RLEWTLISLA VLSFGGIAIA
QALFPLWTSH PATAGLRIHL SNGLYINAAL DRLLSGWSAR ATS
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