| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3403 |
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| Symbol | |
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| ID | 6411077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3640925 |
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| End bp | 3641803 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642713283 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001992380 |
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| Protein GI | 192291775 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGC TCAACTACAA TCATCTGCGC TACTTCTGGG CGGTCGCGCA TGACGGCAAT
CTGACCCGCA CGGCGCAGCG GCTGAACCTG ACGCAGTCGG CGCTGTCGGT GCAGATCCGC
AAGCTCGAGG AGCGGATCGG CCACGCGCTG TTCGAGCGCC GGGGCCGGCA ACTGCATCTC
ACCGAAGCCG GCCGCATCAC CCTCGATCAT GCCGACGCGA TTTTTGCCAC CGGTGAGGAG
CTGATCGATA CGCTGCGCAA CACCGGGGTG GCGCGACAGG CGCTGCGGGT GGGGGCGCTG
GCGACGCTGT CGCGAAACTT TCAGATGGCG TTTCTGCGAC CGGTGCTCGG CCGGCCCGAC
GTCGAACTGA TCCTGCGCTC GGGCAGTGCG GCGGAGCTGC TGCAACTGCT CGCGGCGCTG
AGCCTCGATG TGGTGCTGAT CAACCACGCC CCGGCGCGCG ATAGCGTCAA CCGCCTGGTG
GTCCACCGGC TGGCCGAGCG CTCGGTCAGC CTGATCGGGA CCCGCGCCCG GCTGCGGCGG
AAGGGAAGTC TCGAAGACCG GTTGCGCGGC CATCCGGTGA TCGTGCCGAC CGCGGGCAGC
AGCATCCGGA TGGGTTTCGA CGCGCTGGTG GCGCGGCTCG GGATCCGGCC GCAGATCGCC
GCCGAGGTCG AGGACATGGC GATGATGCGT CTGCTGGCGC GCGAAGATCT CGGCCTCGCC
GTGCTGCCGC CGATCGTGGT CAAGGACGAG CTCGATGATG GCCGGCTGAT CGAAGCCGAG
CGGCTCGCCG GCATCGTCGA GACCTTCTAC GCGGTGACGA TCGAGCGGCG CTTTCCCAAT
CCGGTGCTCA CCAAACTGCT TCGGGCGAAG AAGATCTAG
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| Protein sequence | MNVLNYNHLR YFWAVAHDGN LTRTAQRLNL TQSALSVQIR KLEERIGHAL FERRGRQLHL
TEAGRITLDH ADAIFATGEE LIDTLRNTGV ARQALRVGAL ATLSRNFQMA FLRPVLGRPD
VELILRSGSA AELLQLLAAL SLDVVLINHA PARDSVNRLV VHRLAERSVS LIGTRARLRR
KGSLEDRLRG HPVIVPTAGS SIRMGFDALV ARLGIRPQIA AEVEDMAMMR LLAREDLGLA
VLPPIVVKDE LDDGRLIEAE RLAGIVETFY AVTIERRFPN PVLTKLLRAK KI
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