Gene Rpal_3375 details

Gene Information

• Locus tag: Rpal_3375
• ID: 6411049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 3623073
• End bp: 3623774
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642713255
• Product: protein of unknown function DUF1018
• Protein accession: YP_001992352
• Protein GI: 192291747

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCTGT CCACCAAGCC CGCGACCACG TCGATGATCG CCACTATCCA CACGCTCAAA 
GGGCGTTTGA AGATGGAGGA CGACACCTAT CGGGATCTGC TGGAGCAGCA GGCCCAAAAG 
CGCAGCGCCA AGGATCTGAG CGTCACCGAA GCCGGCCGCG TGATCGACCG GTTGCGCGAG 
CTGGCCGGCG ATGGCGGCAT CAAGGGCGCG GTCGCCGGCC TCGACAGCGC GATCGGCGGC 
AAGCTGCGCG CGCTGTGGAT CGCCGGTTAC GACCTCGGCA TCGTCCGCGA TCGCACCGAC 
CGCGCGATGC TGTCCTATCT GGAGCGCCAG ACCGGTGTCA GCCATGTCCG CTTTCTCGCC 
GACGCCGGCG TCGCCAACAA GGCGATCGAG GGCCTGAAGC GCTGGATGGC GCGCGACGCC 
AAGGTCGAAT GGCCAACGGA TAGCAGCGAC GTGCGCGGCG CCAAGCGCGC GATCCTCGCC 
GCGCAGTGGC TGCGGCTGAT CGAGCTGCGC GACGTGATCC CGTCGATCGC CCACCATCCG 
CTACGCGATC TGGATCTCTA CGCCTGGCGG CTCGTCGGCA TGAATGGCTG GAATTTCTTC 
GATCTCTGTC ACTTCGACCA GGTGCAGAAC GCCCTCGGCC GCAAGCTGCG CGCCGCCCTG 
GCGAAGCATG GTCAGCACGC CACCACCAAC CAGGAGACTT GA 

 

Protein sequence

MKLSTKPATT SMIATIHTLK GRLKMEDDTY RDLLEQQAQK RSAKDLSVTE AGRVIDRLRE 
LAGDGGIKGA VAGLDSAIGG KLRALWIAGY DLGIVRDRTD RAMLSYLERQ TGVSHVRFLA 
DAGVANKAIE GLKRWMARDA KVEWPTDSSD VRGAKRAILA AQWLRLIELR DVIPSIAHHP 
LRDLDLYAWR LVGMNGWNFF DLCHFDQVQN ALGRKLRAAL AKHGQHATTN QET