| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3316 |
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| Symbol | |
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| ID | 6410989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3574002 |
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| End bp | 3574751 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713195 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001992293 |
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| Protein GI | 192291688 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.655704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCA ACCGCCACGC AACCAAGCTC CGCACCACGC CGTCCCTCGG CGGCCAGAGC
CACGACACCC GCGCCCGGAT GATCGAGGCT GCGATCGAGG TGTTCGGATC GGTCGGCTAC
GACGGCGCCA CCACCCGCCA GCTCGCCGAG CGAGCCGGCG TGAATCAGGC CGCAATCCCC
TACCATTTCG GCGGCAAGCG CGAGCTGTAT GTGGCCGCCG CGCAAGCCAT CGCCGATTAC
ATGCGATCCC GCATCGAGCC GCTGATCGAC GAACTGCGCA GCGCCAGTGT CGATCCAGTC
GGCCACATCG ACGCGGTGGT GATGCGGTTC TTCCAGTTCA TCGCCGGCGA TGAGGAGCCA
GAGGCCTGGA CGGTGTTCTT CGTGCGCTGC GAGCGCGACG CCGACGACGC CTTCCGCATC
ATCTACTATC AATCGGTCGC GCGGTTTCAG GCCGCCTTGA TCGCGGAAGT GGCCGCCGCC
ACCGGGCGTT CGCCAGATGA CGAGGACCTG AAGGTACGGG TCGCGGTCGT GCTCGGCGCT
ATCTCCAACT TCCGCACGCT GCGCAACGTC ATGCTGAGTT CACTCGGCTG GGACACATTC
GACGCCGAGC GGAAGCGGAC CGTGGAGACT GCAGTCCGGC GACTGGCGCT GGCCGAATTG
CTCGGCATCC ACGCCGACGC CCCGTCCGAC GTCCATCCCC CGCTCGGCTC CACGTCCGGG
GCTCAACCAT CACCCACGGC CAGACCGTAA
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| Protein sequence | MKSNRHATKL RTTPSLGGQS HDTRARMIEA AIEVFGSVGY DGATTRQLAE RAGVNQAAIP
YHFGGKRELY VAAAQAIADY MRSRIEPLID ELRSASVDPV GHIDAVVMRF FQFIAGDEEP
EAWTVFFVRC ERDADDAFRI IYYQSVARFQ AALIAEVAAA TGRSPDDEDL KVRVAVVLGA
ISNFRTLRNV MLSSLGWDTF DAERKRTVET AVRRLALAEL LGIHADAPSD VHPPLGSTSG
AQPSPTARP
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