| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3277 |
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| Symbol | |
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| ID | 6410947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3527228 |
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| End bp | 3528814 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642713153 |
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| Product | copper resistance protein CopC |
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| Protein accession | YP_001992254 |
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| Protein GI | 192291649 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1276] Putative copper export protein
[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.862624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCC GCGGGCGCTG GCTGGCCTGG ATCACGGCGA TTGTCGTGGC CCTGTGGCCG
GCGCTCGCGG CGGCGCATGC AAGCCTCGTC GCCAGCGACC CTGCTTCTGA AGCGGCGCTG
GCGACGTCGC CTACTACTTT CTCGCTGACC TTCAACGAAC CGGTCACGGC GCTGCTGCTG
CAACTGATCG ACGCGCGCGG TCGCAGCCAA GCGATCACCG CGATCGACCA GGACGGCGCG
ACGCTCCGGT TCACGCCGCC TGCGCCGCTG AGCGAGGGCG CCCATGTGCT GAGCTGGCGG
GTGATCTCCG CCGATGGCCA CCCGATCGGC GGAGCGCTGA CGTTCTGGAT CGGGACGCCC
GGCCAAAGGC TGCCGCCCAT CGTCGTGCCG GACGATCCGG TGCGCCGCAC CGCGATTTGG
GCGACGCGCA TCCTGGTCGG CTTCACGCTG CTCACCGCCG TCGGCGGCGC GGCGTTCCTC
GGCTGGATTG CCGCGGCGCC GCTCGCGGGC GCTGGGATGC TGACCGCGGG ACTTGCGTTA
GTCGGCCTGG CCGCCGTCGT GTTGTCGGCT GGCCTGCAGG GGCTGGATGC GCTGGATCTG
CCGCTGGCCC GGCTCGGCGA TGCCGCCGTC TGGAGAGCCG GTGCGTCGGG ATCGTTTGGC
GACGCCGCGA CGCTGTCGGG CCTTGCATTG GTGTTGGCGC TTGCGGCGCT GCGCTGGCGC
GGCTGGAACG CGCGGTTGTT GTCGCTCGGC GCGGTGGTGA GCCTGGGAAC GGCGTTTGCG
GTCAGCGGCC ATGCTGCCAC GGCCGAACCG CGCTCGCTCT CCGGCGCGGC GGTCTGGGTC
CATGGCGTCA GCTTGGCGCT ATGGATCGGC GCGCTGCTGC CGCTAGCGAT CGCGGTGGGC
AGGCGTGATG CGGCGCCGGC GCCCCTGCGG CGATTTTCCA AGGCGGTCCC GCTCGCGATC
GTGGCGTTGC TGATCAGTGG CATCGCGCTG GCGGCGATCG AGCTCGGCCG GATCGATGCG
CTGTGGCAGA GCGATTACGG CCGGGTGCTG ATCGCGAAGC TGGCGCTGGT CGTGGTGCTG
CTCGCTCTGG CGCTGTGGAA CCGAGTCAGG TTGACGCCGC TCCTGCTAGC CGGCGAAGCA
ACAGCGGTCA GGAGAATGCG CGCCAGCATC GCGGCCGAAC TGGTGCTGGT GATCGCGATT
CTGGGCGTGG TCGGGCTGTG GCGGTTCACC CCGCCGCCGC GTAGCGCCGT ATCTCAATCC
ACAGCCCCCT CGGAGGTCGT GCATCTCCAT ACCGAGCGGG CGATGGCCAC GGTGACGCTG
GCGCCGGCCC GTGCTGGTCC GGTCGAGATC GAGGCGCTGC TGCAGACGGC CGACGAGGCG
CCTCTCGCCG CGCAGGCGCT GACCGTGACG CTGGCCAATC CCGACGCCGG AATCGAGCCG
CTCAGCGCCG AGGCACGGAA GACTGCGGAC GGGCCCTGGC GGGCACGGTT GACGGCGCCG
GTGCCAGGGA CATGGACACT GACGCTCGGC ATCCTGATTT CGGATTTCGA GAAGGTGAAC
CTCGAAGCCC CGATCGTGAT TCGATAG
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| Protein sequence | MRSRGRWLAW ITAIVVALWP ALAAAHASLV ASDPASEAAL ATSPTTFSLT FNEPVTALLL
QLIDARGRSQ AITAIDQDGA TLRFTPPAPL SEGAHVLSWR VISADGHPIG GALTFWIGTP
GQRLPPIVVP DDPVRRTAIW ATRILVGFTL LTAVGGAAFL GWIAAAPLAG AGMLTAGLAL
VGLAAVVLSA GLQGLDALDL PLARLGDAAV WRAGASGSFG DAATLSGLAL VLALAALRWR
GWNARLLSLG AVVSLGTAFA VSGHAATAEP RSLSGAAVWV HGVSLALWIG ALLPLAIAVG
RRDAAPAPLR RFSKAVPLAI VALLISGIAL AAIELGRIDA LWQSDYGRVL IAKLALVVVL
LALALWNRVR LTPLLLAGEA TAVRRMRASI AAELVLVIAI LGVVGLWRFT PPPRSAVSQS
TAPSEVVHLH TERAMATVTL APARAGPVEI EALLQTADEA PLAAQALTVT LANPDAGIEP
LSAEARKTAD GPWRARLTAP VPGTWTLTLG ILISDFEKVN LEAPIVIR
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