| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3276 |
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| Symbol | |
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| ID | 6410946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3525736 |
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| End bp | 3527052 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642713152 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001992253 |
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| Protein GI | 192291648 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGT CGCGATTCTT CCTGCCGATC CTGAAGGAAA ACCCGAAGGA GGCCGAGATC
GTCTCGCACC GGCTGATGCT GCGCGCCGGC ATGCTGCGGC AGGAGGCCGC CGGCATCTAC
GCCTGGCTGC CGCTCGGCCA TCGGGTGCTG AAGAAGATCG AGCAGATCGT CCGCGAGGAG
CAGAACCGCG CCGGCGCGAT CGAGCTGCTG ATGCCGACGC TGCAGCTCGC CGATTTGTGG
CGCGAGAGCG GCCGCTATGA TGCCTACGGT CCGGAGATGC TGCGGATCGC CGACCGGCAT
AAGCGGGAAT TGCTGTACGG CCCGACCAAC GAGGAAATGA TCACCGAGAT CTTCCGGGCC
TACATCAAGT CCTACAAGAG CCTCCCGCTG AATCTCTATC ATATTCAATG GAAATTTCGC
GACGAGCAGC GTCCGCGTTT CGGCGTGATG CGCGGCCGCG AATTCCTGAT GAAGGACGCT
TACTCGTTCG ACGTCGACGA AGCCGGCGCG CGCAAGTCCT ACAACAAGAT GTTCGTCGCT
TACCTGCGCA CCTTCGCGCG GATGGGCCTG AAGGCGATCC CGATGCGCGC CGAGACCGGC
CCGATCGGCG GCGATCTCAG CCACGAGTTC ATCGTGCTGG CCGAGACCGG CGAGTCCGGC
GTCTACATCG ACCGCGACGT GCTGAACCTG CCGGTGCCGG ACGAGAACGT CGATTACGAC
GGCGACCTGA CCCCGATCAT CAAGCAGTGG ACTTCGGTCT ATGCGGCGAC CGAGGACGTC
CACGAGCCGG CGCGCTACGA GAGCGAAGTG CCGGAGGCGA ACCGCCTCAA CACCCGCGGC
ATCGAGGTCG GCCAGATCTT CTACTTCGGC ACCAAGTATT CCGACTCGAT GAAGGCGAAC
GTCACCGGTC CGGACGGGAC CGATGCGCCG ATCCACGGCG GCTCCTACGG CGTCGGCGTG
TCGCGGCTGC TCGGCGCGAT CATCGAAGCC TGCCACGACG ACAACGGCAT CATCTGGCCG
GAAGCGGTGG CGCCGTTCCG GGTGACGATC CTCAATCTGA AGCAGGGCGA CGCTGCGACC
GACGCGGCCT GCGACCAGCT CTATCGCGAG CTGTCGGCCA AGGGCGTCGA CGTTCTGTAT
GACGACACCG ATCAGCGCGC CGGCGCCAAG TTCGCGACCG CAGACCTGAT CGGCATCCCG
TGGCAGATCC ACGTCGGTCC GCGCGGACTC GCCGAAGGCA AGGTCGAACT CAAGCGCCGC
AGCGACGGGT CGCGTGAAAA TCTCGCGCTC GCCGATGTGG TCGCACGACT GACGTAA
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| Protein sequence | MRLSRFFLPI LKENPKEAEI VSHRLMLRAG MLRQEAAGIY AWLPLGHRVL KKIEQIVREE
QNRAGAIELL MPTLQLADLW RESGRYDAYG PEMLRIADRH KRELLYGPTN EEMITEIFRA
YIKSYKSLPL NLYHIQWKFR DEQRPRFGVM RGREFLMKDA YSFDVDEAGA RKSYNKMFVA
YLRTFARMGL KAIPMRAETG PIGGDLSHEF IVLAETGESG VYIDRDVLNL PVPDENVDYD
GDLTPIIKQW TSVYAATEDV HEPARYESEV PEANRLNTRG IEVGQIFYFG TKYSDSMKAN
VTGPDGTDAP IHGGSYGVGV SRLLGAIIEA CHDDNGIIWP EAVAPFRVTI LNLKQGDAAT
DAACDQLYRE LSAKGVDVLY DDTDQRAGAK FATADLIGIP WQIHVGPRGL AEGKVELKRR
SDGSRENLAL ADVVARLT
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