Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_3233 |
Symbol | |
ID | 6410903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 3477778 |
End bp | 3478554 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642713109 |
Product | Triose-phosphate isomerase |
Protein accession | YP_001992210 |
Protein GI | 192291605 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTCC CCGCCGTTCG TCCTCTGATT GCTGGAAACT GGAAGATGAA CGGCCTGAAG GATTCGGTGG CCGAGCTCGA TGCGATGCTG AAAGGCGCCG CGGAGCTGCC GCAGGGCATT GATCTGTTGG TCTGCCCGCC GGCGACGCTG GTGGCAAGCT TCGCGGCGCG AGTCGCGGAA GCCCAGGCCG GCAAGGCACT GCCGTTCTCG ATCGGCGGCC AGGATTGCCA CGCCAACGCC TCTGGCGCCC ACACCGGCGA TATCGCCGCC GAGATGCTGG CCGATGCCGG CGCTGCGGCG ATCATCGTCG GCCATTCCGA ACGCCGCGCC GACCATGCCG AAAACGACTC GATCGTCCGC GCCAAGGCGC AGGCGGTGTG GCGCGCCGGG CTGGTGGCGA TCGTCTGCGT CGGCGAGACT CAGGGCGAGC GCGACGCCGG CCACACCCTC GATGTCGTCG CCGGCATGCT GGCCGGCTCG CTGCCGGACG GCGCGACCGC GGCGAATCTG GTGGTGGCCT ACGAGCCGGT CTGGGCGATC GGCACCGGAC GCACCCCGAC CGCGGCCGAT GTCGAGGAAG TTCATGGCTT TATCCGCAAG ACTTTGAGCG ATCGGTTCGG CGCGGCAGGC GAGACGATGC GAATCCTCTA CGGTGGCTCG GTGAAGCCCT CGAACGCCCG CGAATTGCTG GCAGTGCCGC ACGTCAACGG CGCGCTGATC GGCGGCGCCA GCCTCAAGGC GTCCGATTTC CTTGCGATTG CGGCGGGCTG CCCCTAA
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Protein sequence | MPVPAVRPLI AGNWKMNGLK DSVAELDAML KGAAELPQGI DLLVCPPATL VASFAARVAE AQAGKALPFS IGGQDCHANA SGAHTGDIAA EMLADAGAAA IIVGHSERRA DHAENDSIVR AKAQAVWRAG LVAIVCVGET QGERDAGHTL DVVAGMLAGS LPDGATAANL VVAYEPVWAI GTGRTPTAAD VEEVHGFIRK TLSDRFGAAG ETMRILYGGS VKPSNARELL AVPHVNGALI GGASLKASDF LAIAAGCP
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