Gene Rpal_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3184 
Symbol 
ID6410854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp3431648 
End bp3432304 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID642713061 
ProductSCP-like extracellular 
Protein accessionYP_001992162 
Protein GI192291557 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.14634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCC CCGTCATTGC GAGCGCATCG AAGCAATCAA CGGCCCCGTG CACGGTGCTG 
GATTGCTTCG TCGCTGCGCT CCTCGCAATG ACGGTAATAC TGGCGGTGAT AACAACTTCG 
AGCGCTCCCG CCTTCGCCGC CGGGCCCGCC GAGATGATCT CCGACTTCCG CGCCAAGAAC 
GGCGAGGGCA AGGTGGTGAT GGACGCGACG CTGAATGCGA TCGCGCAGCG GCAGGCCGTC 
GCAATGGCAT CGAAGGACGT CCTCAGTCAC GAAGCCGGCG GCTCGTTCAC TTCGCGCGTG 
GCGCCGGCCA ACGTGTCGCG CGCCGCCGAG AACATCGCTT ACGGCTATCC GGATTTTCCG 
AACACGCTGA AGCAGTGGAT CAACTCGCCG GGCCACCGCG CCAACCTGCT GCTGAAAGGC 
GCCTCCAAGG TCGGCGTTGC CAGCGTCCGA TCGAGCGCGA GCGGCCGGAC CTATTGGGCG 
ATGGTGATCG CCGGCGGCGA CGAGAAGCCG AAGGCCAAGC CGCCAGCAAA GTCAGCCAAG 
CCTGCTGCGA CTTCCGCGAA GTTGACCGAC AAGGAAAAGC CGGCGAAGCC CAAGTCGGTT 
CAGCCGAAGT CGGTGCAGCG TGACTGCAGC ATCAAGATGC TGGGCCTGTG CTTCTGA
 
Protein sequence
MSFPVIASAS KQSTAPCTVL DCFVAALLAM TVILAVITTS SAPAFAAGPA EMISDFRAKN 
GEGKVVMDAT LNAIAQRQAV AMASKDVLSH EAGGSFTSRV APANVSRAAE NIAYGYPDFP 
NTLKQWINSP GHRANLLLKG ASKVGVASVR SSASGRTYWA MVIAGGDEKP KAKPPAKSAK 
PAATSAKLTD KEKPAKPKSV QPKSVQRDCS IKMLGLCF