| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3177 |
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| Symbol | |
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| ID | 6410847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3423035 |
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| End bp | 3424615 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642713055 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_001992156 |
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| Protein GI | 192291551 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0715298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGGGT TTTGGCTCCA GACCTTTGGA TTTCCTGAGA TCCGCAGCTT CGACGGTCCG
GTCCGGCTCA ATCTGCGCAA AGGGCTGGCG CTGCTGGTCC AACTCGCGGA GGCGCGCGCA
GCGGTGTCCC GGGACGTCGT CGCCACCTTG CTGTGGCCGG ACAGCGCCAT CGACGTTGCC
CGCGCGCGGC TGCGGCGCTT GCTGCATCGC ATCGAGCAGG CGCTCGGTCA GCCTGTGTTC
GAGACCGACC GGACCAGCCT GCGTTGGTCA CCCTCGGTCG AACTCAGCGT CGATGCGCAG
CTGTTCGAAG CCGCCTGTGA AAGCGGGGAT TTCGCGCAAG CCTGCGGCTA TTATCACGGC
GATTTCCTCG CCGGCTTCGC GTTGCCGGAC TGTGCCGAGT TCGAGGAGTG GGCGTTCTTC
CGCCGCGAGG CGCTGCGAGG ACGCTACCTG CACGCACTGG AGCGCTTGGT GCAGGACAAC
AACGCCGCCG GCGATCATGC AGCGGCCGCA GTTCGTGCGA CGCGTCTGGT GGAATTGGAT
CCGCTCAGCG AGATCTACGG CCGCCATCTG ATCCGCAGTC TGCTGCTGGC AGGCGAACGG
CAGGCGGCGG AACGCCATCA CGCCGCACTG ACCCGGCGGC TGCACGATGA GCTCGGGGTG
GCGCCCGAGG CCGAGACCGA GGAGTTGATG CAAGAGGCCG CGATGCCGAC TGCTCTCGCT
GTCCCGGTGA CGCGATATGC CGAGGGCGAC AGCATCCACT TGGCGTATCA GACCTTCGGC
AGCGGCGAGT TCGACATCCT GGTCATGCCG GGCTTCGTTT CACATGTCGA ACGGGTGTGG
GAGCATCCGT CGTGCCGGGC GTTTCTCGTT TCGATGATGG CGCTCGGCCG GCTGATTATC
TTTGATCGCC GCGGCGTCGG GCTTTCGGAC CGGGTCGGCT CGGCTCCGAA TGTCGACGTC
ACCGCCGAGG ATATCGGCAC CGTGCTGCGG GCTGCGCAGT CGCGCCGCGT CGTGCTGTTT
GGCGCATCCG AATGCGGACC GGCCTGCATC AAATTCGCGG TCGATCATCC TCGCCTCGTC
GCGGGCCTGA TCTTGTTCGG CTCGCTTGCC AAAGGCTGTC GCACCCCTAA CTACCCGTAC
GCCTTGACGG TGGAGCAGTT CGAGATTTGG CGCCGGCAGC TGATCGGCGC ATGGGGCAGC
GCAGCCGGCA TCGAGACCTT CGGCCCCAGT CTAGCGCATG ACGCCAAATC AAAAGCGTGG
TGGGCCGGAC TGCTGCGCGC TGCATCCAGT CCCGGCGGCA TCTGGGCGGT GCTCGCAGCC
TTGCGCGACG CCGACGTCCT GGAGCTGCTG CCCAAACTAT CCGTGCCGAC CTTGGTGCTG
CACCGCCGCG GCGACCGCGC CGTCCGGATC GCCGCGGGAC GCGACATGGC CGCTCGGATC
GTCGGCGCCG AATTCGTCGA GCTCGACGGC GACGACCACT GGTTCTTCGC GGGGGACCAA
CGCCCCGTAC TCGACGCCAT CAGACAGTTC GTAAGCGACC TTCGCCGCCC AGGTCCGAAG
CGCACGCGGC CACGTACATA G
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| Protein sequence | MTGFWLQTFG FPEIRSFDGP VRLNLRKGLA LLVQLAEARA AVSRDVVATL LWPDSAIDVA
RARLRRLLHR IEQALGQPVF ETDRTSLRWS PSVELSVDAQ LFEAACESGD FAQACGYYHG
DFLAGFALPD CAEFEEWAFF RREALRGRYL HALERLVQDN NAAGDHAAAA VRATRLVELD
PLSEIYGRHL IRSLLLAGER QAAERHHAAL TRRLHDELGV APEAETEELM QEAAMPTALA
VPVTRYAEGD SIHLAYQTFG SGEFDILVMP GFVSHVERVW EHPSCRAFLV SMMALGRLII
FDRRGVGLSD RVGSAPNVDV TAEDIGTVLR AAQSRRVVLF GASECGPACI KFAVDHPRLV
AGLILFGSLA KGCRTPNYPY ALTVEQFEIW RRQLIGAWGS AAGIETFGPS LAHDAKSKAW
WAGLLRAASS PGGIWAVLAA LRDADVLELL PKLSVPTLVL HRRGDRAVRI AAGRDMAARI
VGAEFVELDG DDHWFFAGDQ RPVLDAIRQF VSDLRRPGPK RTRPRT
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