Gene Rpal_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_3146 
Symbol 
ID6410816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp3392121 
End bp3392777 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID642713024 
ProductNitrile hydratase 
Protein accessionYP_001992125 
Protein GI192291520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.149044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCG CACACGACAT GGGCGGCATG GACGGGTTCG GGCCAATTGT GATTGAGCCC 
CATGAGCCGC TGTTTCATGC TGCATGGGAG CGCCGCGCCT TCGCACTGAC GCTGGCGATG 
GGACGGCCCG GTGGCTGGAA CATCGACATG TCGCGGTTCG CCCGCGAGAA CCGCGCGCCG 
ATCGATTATC TGTCGAAGAG CTACTATCAG CTCTGGCTCG CGGGCCTCGA AGTGCTGATG 
GCCGAGCGCG GCCTCGTCAC CGCCGACGAG ATCGCCGCGG GTCGCCCGCT GCATCCGCGC 
AGGGACGTCC AGGTGCTGAC CGCTGCGGAC GTTACACCGA TGCTGGCACG CGGCGCACCA 
ACCGAACGCG ACGCTGCGGC CCCTGCCCGG TTCGGCGTCG GCGATCATGT CCGTGCCAAG 
GACCTGCATC CACGAACCCA TATCCGCCTG CCGCGCTACG TGCGCGGCCG GATCGGCACC 
ATCGAACTGG TACACGGCGC GCACGTGTTT CCGGACAGCC ACGCGCATGG CGGCGGCGAG 
CAGCCGCAAT GGCTTTACAC GGTGGCGTTC GAAGCACGCG AATTGTGGGG CGACGATGCT 
GACCCGACCT CGCGTGTCTC GGTCGATGCG TGGGACTCCT ATCTGGAGCG CGCGTGA
 
Protein sequence
MNGAHDMGGM DGFGPIVIEP HEPLFHAAWE RRAFALTLAM GRPGGWNIDM SRFARENRAP 
IDYLSKSYYQ LWLAGLEVLM AERGLVTADE IAAGRPLHPR RDVQVLTAAD VTPMLARGAP 
TERDAAAPAR FGVGDHVRAK DLHPRTHIRL PRYVRGRIGT IELVHGAHVF PDSHAHGGGE 
QPQWLYTVAF EARELWGDDA DPTSRVSVDA WDSYLERA