| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3134 |
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| Symbol | |
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| ID | 6410805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 3380410 |
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| End bp | 3381198 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642713014 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001992115 |
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| Protein GI | 192291510 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCCA GTCCCGACCT CTTGCCGGAC GAGATCGCCC GTTTCGGCAC TGATCCCGCC
GCGGCCTTTG CGGCGAACCT GACGTCGGTT CAGGAGCGGA TCGCGGCCGC TTGCCATCGC
TGCGGGCGAA GCGCCGGTGA GGTGCGTCTT TTGCCTGTCA CGAAGACAGT GCCGGCCGGT
GTGCTTCGCC GGGCCTATGC GGCCGGGATC TCAGAATTTA GCGAAAACAA GCTACAGGAG
GCCCGCGACA AGCGCGACAT CCTGGCGGAT CTGCCGATCC GCTGGTCGAT CATCGGCCAC
CTTCAGACCA ACAAGGTGAA GTACCTCGTT CGGTTTGCGG CTGAATTCCA TGCACTCGAC
AGTCTGCGGC TCGCCGATGA ACTCAATCGT CGGCTGGATG CGGAGGGACG CGATCTCGAC
GTGTTCGTGC AGGTCAACAC CTCGGGCGAG GCGAGCAAGT ACGGTCTTGC TCCCTGTGAC
CTCGTTCCCT TCATCGAGCG TCTGTCCGAC TATCCGCGGC TCAAGCCGCG CGGTCTGATG
ACGCTGGCAA TCTTCAGTGC CGAGACCGAA CGCGTCCGCG GCTGCTTCCG GCTGCTGCGG
GATCTGCGTG ATCGCGCGAT ACGCGTTCAT CCCGACCTGA CCGAATTGTC GATGGGCATG
TCGGGTGATT TCGAGTTCGC GATCGAGGAG GGGGCGACCG TGGTGCGGGT CGGACAGGCG
ATCTTTGGCG CACGGCCGAC CACCGACAGG TTCTACTGGC CACACGCAAG CGTCGACCGA
GGATCCTGA
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| Protein sequence | MPASPDLLPD EIARFGTDPA AAFAANLTSV QERIAAACHR CGRSAGEVRL LPVTKTVPAG
VLRRAYAAGI SEFSENKLQE ARDKRDILAD LPIRWSIIGH LQTNKVKYLV RFAAEFHALD
SLRLADELNR RLDAEGRDLD VFVQVNTSGE ASKYGLAPCD LVPFIERLSD YPRLKPRGLM
TLAIFSAETE RVRGCFRLLR DLRDRAIRVH PDLTELSMGM SGDFEFAIEE GATVVRVGQA
IFGARPTTDR FYWPHASVDR GS
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