| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3109 |
|---|
| Symbol | |
|---|
| ID | 6410780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 3352759 |
|---|
| End bp | 3353061 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642712989 |
|---|
| Product | Antibiotic biosynthesis monooxygenase |
|---|
| Protein accession | YP_001992090 |
|---|
| Protein GI | 192291485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.852917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCG AAATCGCACA GATCGACGTC AAACCCGGCA GCGAGGCGGA CTTCGAAGCC
GCGGTCGCCA AGGCGCGCGA GGCGTTCGGC CGCTCAAAAG GGTTCTGCGG CTTCGAGCTG
CACAAGTCGA TCGAAAAGCC GCAGCGCTAC CGCCTGATGG TGAAGTGGCA GACCCTGGAG
AACCACACCG TCGACTTCCG CGGCTCGGAG AACTTCACCG AGTGGCGCGG CCTCGTCGGC
GGCTTCTTCG CCGCGCCGCC GGATGTCGAG CACACCGAGA CGGTGCTTAC GTCTCAGACG
TAA
|
|---|
| Protein sequence | MITEIAQIDV KPGSEADFEA AVAKAREAFG RSKGFCGFEL HKSIEKPQRY RLMVKWQTLE
NHTVDFRGSE NFTEWRGLVG GFFAAPPDVE HTETVLTSQT
|
|---|
| |