| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3101 |
|---|
| Symbol | |
|---|
| ID | 6410772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 3346011 |
|---|
| End bp | 3346583 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642712981 |
|---|
| Product | protein of unknown function DUF1211 |
|---|
| Protein accession | YP_001992082 |
|---|
| Protein GI | 192291477 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3548] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.642215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC ATTTCGAAAC GCGGCGGCTC GAGCAGCTCA GCAACACCAT CTTCGGTGTG
GCGATGACGC TGCTCGCCTA TCAGGCCCCG CGTGAGAAAT TCGCCAGCGC CGATCCGCAG
TGGCGTGAGA TCTGGCACCT CTACGGCGCC TTTCTGTCGA CCTTGCTGCT CAGCTTCATC
GTCGCCGGAA TGTTCTGGTA CAGCCACCAG CGCAGGCTGA CTTATGCGAC CGATGCCGGC
CGCATCGAAG TGCTGGTGAA CCTGTTCTTT CTGCTGTCGA TCATCGTGCT CCCGGTGACC
TGCGGCCTCT ACGGCAACAA CTACGACTCC CCCAACGTCA CCACGCTGTA CAGCTTCAAT
CTGTTTATGA TTTCGCTGTT CAACACGGTG CTGTGGACGA TCGCGGTGGC GCGGCGGCGC
GACTGGCTGA CCTTGATCAC GCCGGCTTTC GCCCTCGTGG TGATGGGCGC TGCGTTGCTG
GGGTGTCTGA TCCAACCGCA CTGGCCGAAA TTCATCTGGC CGCTGGCGTT CCTGTCGCCC
GCGATCAGTG CGTGGATCGA AAAGCGGCGT TAG
|
|---|
| Protein sequence | MTGHFETRRL EQLSNTIFGV AMTLLAYQAP REKFASADPQ WREIWHLYGA FLSTLLLSFI
VAGMFWYSHQ RRLTYATDAG RIEVLVNLFF LLSIIVLPVT CGLYGNNYDS PNVTTLYSFN
LFMISLFNTV LWTIAVARRR DWLTLITPAF ALVVMGAALL GCLIQPHWPK FIWPLAFLSP
AISAWIEKRR
|
|---|
| |