| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_3097 |
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| Symbol | |
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| ID | 6410768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 3341877 |
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| End bp | 3342989 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642712977 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_001992078 |
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| Protein GI | 192291473 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.282849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG CCGCGGCGCC GCCATCGTCC CGATTTCGCG GCGTACGGAT CTGGCTGACC
CTGGTGGCGG CCCTGATCGC CGTGATGGTC CTGGTAGGCG GCGCGACCCG GCTGACCGAA
TCCGGGCTGT CGATCGTCGA ATGGAAGCCG GTCACCGGCT CGCTGCCGCC GCTCACCGAG
ACGCAGTGGC ACACGGCGTT CGATGGCTAC AAGCAGATCC CGCAATATCG CGAACTGAAC
GCCGGCATGA CGCTCGATCA GTTCAAGACG ATCTTCTGGT GGGAATGGAG CCACCGGCTG
CTCGGCCGGG TGATCGGCAT CGTCTATCTG CTGCCGTTTC TCTGGTTCCT GTGGCGCGGC
GCGATCGGAC CGGAGTGGAA GCGGGCGCTG TGGATCATCT TCGCGCTCGG CGCACTACAG
GGCGCGGTCG GCTGGTGGAT GGTGGCGTCC GGCCTGTCGC AGCGGACCGA AGTGTCGCAG
GTGCGGCTCG CCACCCATCT GTCGCTGGCG CTGATCATCT ACGCCGCGAT CGTCTGGACG
TTGCGCCGAA TGGCCGACCG GGCCCGCGTC GCTGCGCCGG CGCGACTGAA AGTGACCGCG
CTGGCGCTGC TGGGGCTGAC CTTCGTGCAG CTCTATGCGG GTGCGCTGGT GGCCGGACTG
CGCGCCGGGC GGCTGTACAA CACCTGGCCC ATGATCGACG GCGCGCTGAT CCCGGACGCG
GCGCGGCTGT GGTTCGAGAG CCCGTGGTGG AAGAACCTGT TCGACAATCA TCTCACCGTG
CAATTCGATC ACCGTATGCT GGCCTATGCG CTGTGGACGC TGGCGGCGCT GCACATGATC
GACGCGCTGC GGACGCGGGC AGGGGCGGCG GCACGCGGCG CGGTGCTGCT GTTCCTGGCA
CTGACGGTTC AGGCCGCGCT CGGCATCTTC ACCGTGCTGT ACGCCGCGCC GATCGACCTT
GCCCTCGCGC ATCAGGCCAT GGCGCTGGTG GTGCTGACGC TGGCCGTGCT GCAGGCTGAA
CGGCTGACCG CGACGCGCGA GGATCGAACC GCGCTCGGTC GCGGCGCTGC CGGGCGACTG
GCGGTCCCGT CTGAGCTATT CCCGTCGGCA TAG
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| Protein sequence | MTIAAAPPSS RFRGVRIWLT LVAALIAVMV LVGGATRLTE SGLSIVEWKP VTGSLPPLTE
TQWHTAFDGY KQIPQYRELN AGMTLDQFKT IFWWEWSHRL LGRVIGIVYL LPFLWFLWRG
AIGPEWKRAL WIIFALGALQ GAVGWWMVAS GLSQRTEVSQ VRLATHLSLA LIIYAAIVWT
LRRMADRARV AAPARLKVTA LALLGLTFVQ LYAGALVAGL RAGRLYNTWP MIDGALIPDA
ARLWFESPWW KNLFDNHLTV QFDHRMLAYA LWTLAALHMI DALRTRAGAA ARGAVLLFLA
LTVQAALGIF TVLYAAPIDL ALAHQAMALV VLTLAVLQAE RLTATREDRT ALGRGAAGRL
AVPSELFPSA
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